Gene Swit_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1826 
Symbol 
ID5198037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2043894 
End bp2044793 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID640581372 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001262325 
Protein GI148554743 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID[TIGR03213] 2,3-dihydroxybiphenyl 1,2-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT CGCGCCTCGG CTATCTCAGC TTCACCTCCG TCGACCTGCC CGGCTGGCGG 
CGTTTCGGAA CCGGCGTCAT CGGGGCGATG GACGTCCCCG GAACGGAGGG GGACGTCCGC
CTCAAGATCG ACGAGCATCC GTTCCGCATC CGCGTCGAGG CCGGCGACGC CGATCGGTTG
AGCGGCATCG GCTGGGAGCT GGCGTCGCGG GCGGACCATG ACGCGCTGTA CGAGCGGCTG
AACGGCCTCG GCCTCAAGCT GCGCGACGGC GATGCGGCCG GCGCGGCGAA ACGCTGCGTC
GCCGATTATT TCGCGACCGA GGACCCGGCC GGGAATATCA TCGAATTCTA CTGCGAGCGC
ACCGGGTGCG GCGATCCCTT CCGGTCGCCG GCCGGCGTCC GGGGGTTCGT CACCGGCGAG
ATGGGGCTCG GCCATGTCGT CGTCCCGGCC GCCGGGGCGC TGGAGGAGAC CCACGACTTC
TACCGCTCCG TGCTCGGCTT CGGCGCCAGC GACGACCTGA CCATCGCGCT GCCGATCGAG
GGCGTCCCGC CGATGCGCGT GCTGTTCATG CACGCCGACA ATCCCCGCCA CCACAGCCTC
GCGCTGTTCA GCAAGCCGTC GCCGACCGGG ATCGTCCATC TCATGCTCGA GCTGGAGGAC
GTCGACGAGG TCGGGCGTTG CCTCGACCGG GTCGGGGCCC ACGGGCTGGG GCTGATGGCG
ACGCTCGGCC GCCACTGCAA CGACAATATG CTGTCCTTCT ACGTCAACGG GCCGGCGGGG
GTGGCGGTGG AGATCGGGTG CGAGGGGCTG CAGCTCGACT GGACCCGGTT CGAACCCACG
GTGAGCAGCG TGGCGGATCA TTGGGGGCAT GCCTATCGAC AGCTCGCCGA CGGCCCCTGA
 
Protein sequence
MKVSRLGYLS FTSVDLPGWR RFGTGVIGAM DVPGTEGDVR LKIDEHPFRI RVEAGDADRL 
SGIGWELASR ADHDALYERL NGLGLKLRDG DAAGAAKRCV ADYFATEDPA GNIIEFYCER
TGCGDPFRSP AGVRGFVTGE MGLGHVVVPA AGALEETHDF YRSVLGFGAS DDLTIALPIE
GVPPMRVLFM HADNPRHHSL ALFSKPSPTG IVHLMLELED VDEVGRCLDR VGAHGLGLMA
TLGRHCNDNM LSFYVNGPAG VAVEIGCEGL QLDWTRFEPT VSSVADHWGH AYRQLADGP