Gene Swit_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1824 
Symbol 
ID5199371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2041547 
End bp2043151 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content73% 
IMG OID640581370 
Productpeptidase M28 
Protein accessionYP_001262323 
Protein GI148554741 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC TGAGATTCTC GCTGGCCCTG CTCGCCCTGC TGCCGCTGCC CGCCGCCGCG 
ACGCCGCCGC CGCGCGCCGC CCAATGGTTC GCCGATGTCG CCGCGATCGC CGACGACGCC
AATGAAGGCC GCGCGACGGG ATCGCGGGGC CATCTGCGCG CCGCCGATTA TGTCGAGCGT
CGCTTCCGCG CGATCGGCCT CGCGCCCGCC GGCGAGCATG GCGGCTTCCG CCAGCAGGTC
GCGCTCGAGG AGCAACGCAT CGATTATGCG CGCTCGCATG CCGAGCTGAC CGATGCGCAA
GGCAAGGCCG TCCCGCTCGC GCTCGGCAGC GACATGCTGA TCGCCGCCTG GGCCGCGCCC
CGCCCCGCCA GGGTCGACGC GCCGCTGGTC TTCCTGGGCT ATGGCCTGCA CCTGCCCGAG
CAGGGGCATG ACGATTTCGC CGGCGTCGAC CTGAAAGGGA AGATCGCGGT GGTGATCGGC
GGCGGCCCCG CCGGCATCGC CGGCCCGATC AAGGCGAGCA ACCGGTCGGA GCGCAGCAGG
CTGCTCGCGG CGGCGGGCGC GGTCGGCGTC ATCGCGCTCA CCTCGCCCCG GCAGATCGAG
ATCCCATGGG AGCGCCAGAC GCTGCTGGCG CGGCAGGGGG ACATGTACCT CGCCGACGCC
GCGCTGCGCG ACGTGCCCGA CGATTTCTTC CTGGCGAGCG TCGATCCCGC CGCCGCCGAG
ACGCTGTTCG CCGGCAGCGG CCACAGCTTC GCCGAACTCG CGGCCGCCTC CGACGCATCG
GCGCCGGTGC CGGTCTTCGC CCTGCCGGTC CGGCTCCGGG CGACGATCGC CGCCGAGCGG
CGCCGGCTGG TCTCGCCCAA CCTCGTCGCG CGGCTCGACG GCAGCGATCC GGCGCTCCGG
GACGAACATG TCGTCGTCTC CGCGCATCTC GACCATGTCG GCATCGGGCC GGCGATCGAC
GGCGACGCCA TCTACAACGG CGCGATCGAC GACGGCTCGG GCGTGGCGAC GGTGCTCGAC
ATCGCCGCGC GCGTCGCCGC CGGCGAACGG CCGAAGCGAT CGATGCTGTT CCTGATCGTC
ACCGCCGAGG AGCCGGGCCT GCTCGGCTCG ACCTATTTCG CCCGGAAGCC GACCGTGCCG
GCCGAGGGCC TGATCGCCGA TCTCAATTTC GACGTGCTGC TGCCGCTCTG GCCGCTGACC
ACGATCCTCG CCCAGGGCGA CGGGGAAAGC AGCCTCGGCG ACCAGGCGCG CGAGGTCGCG
GCGCGGCACG GCCTGGCGCT GGTCCCCGAT CCGCTGCCCA ACCGGAACAG CTTCGTCCGC
ACCGACCAGT ACAGCTTCGT GCGCGCCGGC ATCCCGGCGC TCGCGTTCAA ATTCGGCTTC
GCGCCGGGCA CCGAGGCGTT CCGGCTGGAG GGCGCGTGGC GCGCGACCCG CTACCATGCC
CCGAACGACG ATATCCGTCA GCCGGGGCTT CGACCGGAGG AGATGGTGCG GTTCGACGAC
TATGCCGCCG ACGTCGCGAT CGCGGTCGCC AATGCGCCAG CGCGGCCGCG CTGGCTCGAC
GGAAGCGTCT TCAAGCGCTT CGCGCGCGGC TATGCGGTGA GGTAG
 
Protein sequence
MLDLRFSLAL LALLPLPAAA TPPPRAAQWF ADVAAIADDA NEGRATGSRG HLRAADYVER 
RFRAIGLAPA GEHGGFRQQV ALEEQRIDYA RSHAELTDAQ GKAVPLALGS DMLIAAWAAP
RPARVDAPLV FLGYGLHLPE QGHDDFAGVD LKGKIAVVIG GGPAGIAGPI KASNRSERSR
LLAAAGAVGV IALTSPRQIE IPWERQTLLA RQGDMYLADA ALRDVPDDFF LASVDPAAAE
TLFAGSGHSF AELAAASDAS APVPVFALPV RLRATIAAER RRLVSPNLVA RLDGSDPALR
DEHVVVSAHL DHVGIGPAID GDAIYNGAID DGSGVATVLD IAARVAAGER PKRSMLFLIV
TAEEPGLLGS TYFARKPTVP AEGLIADLNF DVLLPLWPLT TILAQGDGES SLGDQAREVA
ARHGLALVPD PLPNRNSFVR TDQYSFVRAG IPALAFKFGF APGTEAFRLE GAWRATRYHA
PNDDIRQPGL RPEEMVRFDD YAADVAIAVA NAPARPRWLD GSVFKRFARG YAVR