Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1824 |
Symbol | |
ID | 5199371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2041547 |
End bp | 2043151 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640581370 |
Product | peptidase M28 |
Protein accession | YP_001262323 |
Protein GI | 148554741 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACC TGAGATTCTC GCTGGCCCTG CTCGCCCTGC TGCCGCTGCC CGCCGCCGCG ACGCCGCCGC CGCGCGCCGC CCAATGGTTC GCCGATGTCG CCGCGATCGC CGACGACGCC AATGAAGGCC GCGCGACGGG ATCGCGGGGC CATCTGCGCG CCGCCGATTA TGTCGAGCGT CGCTTCCGCG CGATCGGCCT CGCGCCCGCC GGCGAGCATG GCGGCTTCCG CCAGCAGGTC GCGCTCGAGG AGCAACGCAT CGATTATGCG CGCTCGCATG CCGAGCTGAC CGATGCGCAA GGCAAGGCCG TCCCGCTCGC GCTCGGCAGC GACATGCTGA TCGCCGCCTG GGCCGCGCCC CGCCCCGCCA GGGTCGACGC GCCGCTGGTC TTCCTGGGCT ATGGCCTGCA CCTGCCCGAG CAGGGGCATG ACGATTTCGC CGGCGTCGAC CTGAAAGGGA AGATCGCGGT GGTGATCGGC GGCGGCCCCG CCGGCATCGC CGGCCCGATC AAGGCGAGCA ACCGGTCGGA GCGCAGCAGG CTGCTCGCGG CGGCGGGCGC GGTCGGCGTC ATCGCGCTCA CCTCGCCCCG GCAGATCGAG ATCCCATGGG AGCGCCAGAC GCTGCTGGCG CGGCAGGGGG ACATGTACCT CGCCGACGCC GCGCTGCGCG ACGTGCCCGA CGATTTCTTC CTGGCGAGCG TCGATCCCGC CGCCGCCGAG ACGCTGTTCG CCGGCAGCGG CCACAGCTTC GCCGAACTCG CGGCCGCCTC CGACGCATCG GCGCCGGTGC CGGTCTTCGC CCTGCCGGTC CGGCTCCGGG CGACGATCGC CGCCGAGCGG CGCCGGCTGG TCTCGCCCAA CCTCGTCGCG CGGCTCGACG GCAGCGATCC GGCGCTCCGG GACGAACATG TCGTCGTCTC CGCGCATCTC GACCATGTCG GCATCGGGCC GGCGATCGAC GGCGACGCCA TCTACAACGG CGCGATCGAC GACGGCTCGG GCGTGGCGAC GGTGCTCGAC ATCGCCGCGC GCGTCGCCGC CGGCGAACGG CCGAAGCGAT CGATGCTGTT CCTGATCGTC ACCGCCGAGG AGCCGGGCCT GCTCGGCTCG ACCTATTTCG CCCGGAAGCC GACCGTGCCG GCCGAGGGCC TGATCGCCGA TCTCAATTTC GACGTGCTGC TGCCGCTCTG GCCGCTGACC ACGATCCTCG CCCAGGGCGA CGGGGAAAGC AGCCTCGGCG ACCAGGCGCG CGAGGTCGCG GCGCGGCACG GCCTGGCGCT GGTCCCCGAT CCGCTGCCCA ACCGGAACAG CTTCGTCCGC ACCGACCAGT ACAGCTTCGT GCGCGCCGGC ATCCCGGCGC TCGCGTTCAA ATTCGGCTTC GCGCCGGGCA CCGAGGCGTT CCGGCTGGAG GGCGCGTGGC GCGCGACCCG CTACCATGCC CCGAACGACG ATATCCGTCA GCCGGGGCTT CGACCGGAGG AGATGGTGCG GTTCGACGAC TATGCCGCCG ACGTCGCGAT CGCGGTCGCC AATGCGCCAG CGCGGCCGCG CTGGCTCGAC GGAAGCGTCT TCAAGCGCTT CGCGCGCGGC TATGCGGTGA GGTAG
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Protein sequence | MLDLRFSLAL LALLPLPAAA TPPPRAAQWF ADVAAIADDA NEGRATGSRG HLRAADYVER RFRAIGLAPA GEHGGFRQQV ALEEQRIDYA RSHAELTDAQ GKAVPLALGS DMLIAAWAAP RPARVDAPLV FLGYGLHLPE QGHDDFAGVD LKGKIAVVIG GGPAGIAGPI KASNRSERSR LLAAAGAVGV IALTSPRQIE IPWERQTLLA RQGDMYLADA ALRDVPDDFF LASVDPAAAE TLFAGSGHSF AELAAASDAS APVPVFALPV RLRATIAAER RRLVSPNLVA RLDGSDPALR DEHVVVSAHL DHVGIGPAID GDAIYNGAID DGSGVATVLD IAARVAAGER PKRSMLFLIV TAEEPGLLGS TYFARKPTVP AEGLIADLNF DVLLPLWPLT TILAQGDGES SLGDQAREVA ARHGLALVPD PLPNRNSFVR TDQYSFVRAG IPALAFKFGF APGTEAFRLE GAWRATRYHA PNDDIRQPGL RPEEMVRFDD YAADVAIAVA NAPARPRWLD GSVFKRFARG YAVR
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