Gene Swit_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1817 
Symbol 
ID5200428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2031664 
End bp2032986 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content74% 
IMG OID640581363 
Producterythromycin esterase 
Protein accessionYP_001262316 
Protein GI148554734 
COG category[R] General function prediction only 
COG ID[COG2312] Erythromycin esterase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA TCGGCGCGGT CGCGCTCGGC CTGCTCCTGT CCGCGCCGGC CGTCGCCCAG 
CCCGATCCGG CGGCCGCCTT CGTGGCATGG GCGCGCGACC ATGCCGTGCC GTTGCCCGCC
TGCGACGATC CGTCCATGGC GGCGGTCGGC CGGGCGGCGG GCGCGGCAAG GATGATCGCG
TTGGGCGAGC CGGCGCACGG CGCGCACGAG CCGCTGGCGT TCCGCAACTG CCTGTTCCGC
CATCTGGTCG AGCATCAGGG TTTCACCGCG ATCGCGATCG AGAGCGGCAC CGGCGAGGCC
CGGCGGCTGC ACGACTATGT CGCGGGCGGG CCGGGCGATG CGCGCCAACT GGTCCGCGAG
AGCCTGAGCT GGGGCTTCGG CCGGTTCGCC GAGAATGTCG CGCTGGTCGA ATGGATGCGC
GCTTACAACG CCGATCCGGC GCATCGGCGG AAGATCGCCT TCTACGGCAT CGACATGAGC
GGCGGCGACA GCAGCGGCGC CTGGGCGAAC GCGCGGATCA CGCTCGACGC CGCGCTCGCT
TATCTGGTGC GTTTCGGCGC CACCGAATCA CGCGCGGCGC GAGCGGCGGT CGAGCCTTTC
CTCGGGCGCT TCACCCAGCC CGGCCATGCC GCGCTCGATC GGACCGAACG CCGCCGCCTG
CGCGCGGCGG TCGACGGGCT CGTCCGCTAT CTCGATCGCC ATGGCGACCG CCTCGTCGCG
CTGTCGGGGC GCGAGGAGCT CGACTGGGCG CGCCGCAACG CGGTGCTCGC CCGTCAGCTG
GACCATATGT TTCGGACGTC CGCACCGTCC GGCGAGGAGC TGTCGCCGGA GGATTATCGC
GCCGACGCCG CCCGCGACGC GGCGATGGCC GGCAATGCCC GCTGGGTGCT CGATCGCGAG
GGACCGGACG GGCGCGTCCT GCTGTTCGCG CATGACGGGC ATGTGATGAA CGCGGCGACG
CGCGGCGGCA TCTGGTCGGT CTACCGGCGG GCGCCCAAGG CGATGGGCCA GCATCTCCGC
GCGGCGCTCG GCGACCGGCT GTTCATCGTG CCGATCGCAT CGGGGGCGAA CGGGCCCGGC
CTGCCCCCCG CCGCGCCCGG CGCCGGCAGC CTCGACGTCG CGCTGGCGCG GGTCGGAAGC
CAGCGCTTCC TGCTCGACCT GCGCCCCGCC CGCACGGCCG GGCCGGCGGC CGGCTGGCTG
CGGCGGACCC AGTCGATCCG CGCCAACCAT GTGACCGAGG CCGAGATATC CCCCGCGACC
GCGATGGACG CGGTCGTCTT CATCGCCACG CTGACCGCCG CGGAAGGTTC GAAGGCTCGA
TAA
 
Protein sequence
MIRIGAVALG LLLSAPAVAQ PDPAAAFVAW ARDHAVPLPA CDDPSMAAVG RAAGAARMIA 
LGEPAHGAHE PLAFRNCLFR HLVEHQGFTA IAIESGTGEA RRLHDYVAGG PGDARQLVRE
SLSWGFGRFA ENVALVEWMR AYNADPAHRR KIAFYGIDMS GGDSSGAWAN ARITLDAALA
YLVRFGATES RAARAAVEPF LGRFTQPGHA ALDRTERRRL RAAVDGLVRY LDRHGDRLVA
LSGREELDWA RRNAVLARQL DHMFRTSAPS GEELSPEDYR ADAARDAAMA GNARWVLDRE
GPDGRVLLFA HDGHVMNAAT RGGIWSVYRR APKAMGQHLR AALGDRLFIV PIASGANGPG
LPPAAPGAGS LDVALARVGS QRFLLDLRPA RTAGPAAGWL RRTQSIRANH VTEAEISPAT
AMDAVVFIAT LTAAEGSKAR