| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1801 |
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| Symbol | |
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| ID | 5200735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2013631 |
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| End bp | 2015271 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581347 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001262300 |
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| Protein GI | 148554718 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTCAG GACTCACCTT GAACGAGCGT CGATGGGGCG TGGCGATCCT GGCCGTGCTG
ATCTGCATCG GGGCCGCCAT GGCTGCGGCG GGCGCCGACC GCGCCGATCC CTTCCAGGTG
CACGGCTTCC TGGTGATGGC GTACAGCCTG ATCGTGCTCT GCGTCGTGCT GCGCGGCTAT
GACGAGCCGG GGCCGGGCCG GCTGGAGAGC TATTATGACG ACCCGAGCAA GGCGGGGATC
GTCATCGCCA TGCTCTGGGC GGTGTTCGGC ATGTTCATCG GCGACTGGGT CGCGTGGCTG
CTCGCCTATC CGGACATGAC CTTCGACGCC GCCTGGTCGA GCTTCGGGCG GCTGCGCCCG
GCCCATACCA CCGGCGTGAT CTTCGGCTTC GGCGGCAACG CCCTGATCGC CACCTCCTTC
CATGTGATGC AGCGGACCTC CCGCGCGCGC CTGCCGGACC AGTTCAGCCC ATGGTTCGTG
CTGGTCGGCT ACAACCTGTT CTGCCTGCTG GCGGTGTCCG GCTATTTCCT GGGGATCACC
CAGTCGAAGG AATATGCCGA GCCCGAATGG TATGCCGACA TCTGGCTGGT CGTCGTCTGG
GTGACCTATC TGCTGCTCTA TCTGCGCACG CTCGCGCGGC GGAAGGAACC GCACATCTAC
GTCGCCAACT GGTATTATCT GGCGTTCATC CTGGTGGTAG CGATCCTCCA CATCGTCAAC
AACCTCGCGG TGCCGGCCTC GTTCGGCGGC GCCAAGAGCT ATTCGCTGTT CTCGGGCGTC
CAGGACGCGA TGACCCAGTG GTGGTACGGG CACAACGCCG TCGCCTTCTT CCTGACCGCC
GGCTTCCTGG GCATGATGTA CTATTATCTG CCCAAGCGCG CCGGGCGGCC GATCTACTCC
TACCGCATGT CGATCATCGG CTTCTGGGGG ATCACCTTCT TCTACATGTG GGCGGGGTCG
CACCACCTCC ACTACACCGC GCTGCCGCAA TGGGTGCAGA CGCTGGGGAT GACCTTCTCG
GTCATGCTGC TGGTGCCCTC GTGGATCGCC GCCGCCAACG CGCTGCTGAC GCTCAACGGC
GCGTGGGACA AGGTCCGCGA CGACGCGACG TTGCGCTTCA TGATGATGGC CGCGATCTTC
TACGGGCTCT CGACCTTCGA GGGATCGTTC ATGGCGATCC GTTCGGTCAA CGCGCTGTCG
CACTATACCG ACTGGACGAT CGGGCACGTC CATGCCGGCG CGATGGGCTG GGTCGCGCTG
ATCACCTTCG GCTCGATCTA TGCCGTCGTC CCCTGGCTGT GGAAGCGCGA GCGGATGCAT
TCGCCGGCGC TGGTCGAGGT CCACTTCTGG CTCGCGCTGG CCGGGACCCT CATCTACGTC
TTCGCGATGT GGAACTCGGG CATCATCCAG GGCCTGATGT GGCGCACCTA TAACGACAGC
GGGACGCTGA CCTACTCGTT CCTCGACTCC ATGGTCGCGA TGCACCCCTA TTATATCGCC
CGCGCGATCG GGGGGCTGCT GTTCCTGATC GGGGCGATCG TCGGCTGCTA CAATATCTGG
ATGACGATCC GCCGGCCGGC CGGGGCGCCG GCCCCGTCGG ACGACGCGCC CCTTCCCGCC
AACCTCCAGC CTGCGGAATA A
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| Protein sequence | MISGLTLNER RWGVAILAVL ICIGAAMAAA GADRADPFQV HGFLVMAYSL IVLCVVLRGY
DEPGPGRLES YYDDPSKAGI VIAMLWAVFG MFIGDWVAWL LAYPDMTFDA AWSSFGRLRP
AHTTGVIFGF GGNALIATSF HVMQRTSRAR LPDQFSPWFV LVGYNLFCLL AVSGYFLGIT
QSKEYAEPEW YADIWLVVVW VTYLLLYLRT LARRKEPHIY VANWYYLAFI LVVAILHIVN
NLAVPASFGG AKSYSLFSGV QDAMTQWWYG HNAVAFFLTA GFLGMMYYYL PKRAGRPIYS
YRMSIIGFWG ITFFYMWAGS HHLHYTALPQ WVQTLGMTFS VMLLVPSWIA AANALLTLNG
AWDKVRDDAT LRFMMMAAIF YGLSTFEGSF MAIRSVNALS HYTDWTIGHV HAGAMGWVAL
ITFGSIYAVV PWLWKRERMH SPALVEVHFW LALAGTLIYV FAMWNSGIIQ GLMWRTYNDS
GTLTYSFLDS MVAMHPYYIA RAIGGLLFLI GAIVGCYNIW MTIRRPAGAP APSDDAPLPA
NLQPAE
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