Gene Swit_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1798 
Symbol 
ID5198241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2011853 
End bp2012731 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID640581344 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_001262297 
Protein GI148554715 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTAG GCGAGCGCGA TCCCCATAGC GGGCACATGA CGACCGGCCA TGAGTGGAAC 
GGGATCAAGG AGCTCAACAC CCCGGTCCCC AAGGCGGTCT GGTTCTTCCT GATCGTGACG
GTGATCTTCT CCGTCGGCTA CTGGGTGCTG ATGCCGGCAT GGCCGCTGGG CCGGACCTAC
AGCCGCGGCC TGCTCGACAA CGACCAGAAG GAGATCGTCG CCAAGCGGGT GAGCGCGGCC
GCCGATGCCC GCGCCGTCTG GACGCGGCGG ATCGCGACGT CGAACTACGA CCAGATCCGC
GCCGATCCCG CCTTGATGGC GAACGTGCGT GAGGACGGCC ACCGCCTGTT CGGCGACAAT
TGCGCCGCCT GCCACGGCAT GGACGCGAAG GGCCATGCCG GCTTCCCCAA CCTGACCGAC
CGGGACTGGC TGTGGGGCGG CGACCCCGAC ACGATCGCGC ATACGATCGC GGTCGGCATC
AACAGCCCGG CGAGCAAGGA CACCCGCGTC AGCCAGATGC TGGCGTTCGG CAAGGACGGC
ATCCTCGCCA ACGACGCGGT GCTCGCCGTC GCCGACTATG TGAAGAGCCT GTCCGATCCC
GCCTGGGCGA AGGGCAAGGC CGTATCGGTG GCCAAGGGAC GGGAGGTGTT CGCGGCGAAC
TGCGTCGCCT GCCATGGCGA CCAGGGACAC GGCAATGCGC AGCTCGGCGC GCCCGACCTG
ACCGACCGGA CCTGGCTCTA CGGCGGCGAT ATCGACGCGA TCTATGCGTC GATCCACAAC
GGGCGGCAGG GCGAGATGCC GGCGTGGGAG CATCGCCTGT CGCCGGTCGA CCGCAAGATC
CTGACGGTCT TCCTGCTCGA CAAGGGCGGC AAGCCATGA
 
Protein sequence
MAVGERDPHS GHMTTGHEWN GIKELNTPVP KAVWFFLIVT VIFSVGYWVL MPAWPLGRTY 
SRGLLDNDQK EIVAKRVSAA ADARAVWTRR IATSNYDQIR ADPALMANVR EDGHRLFGDN
CAACHGMDAK GHAGFPNLTD RDWLWGGDPD TIAHTIAVGI NSPASKDTRV SQMLAFGKDG
ILANDAVLAV ADYVKSLSDP AWAKGKAVSV AKGREVFAAN CVACHGDQGH GNAQLGAPDL
TDRTWLYGGD IDAIYASIHN GRQGEMPAWE HRLSPVDRKI LTVFLLDKGG KP