Gene Swit_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1784 
Symbol 
ID5200471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1998066 
End bp1998992 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID640581331 
ProductLysR family transcriptional regulator 
Protein accessionYP_001262284 
Protein GI148554702 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.132591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCCGC TGAACGTCAC GCTGAAGCAG ATAAGGGCTT TCGTCGCGGC CGCCGACACC 
GGCAGCCTGA CGACGGCAGC CGTGGTCGTG AACTCGACCC AGTCGTCGCT GTCGGTGCTG
ATCCGCGAGC TGGAGGAGGC GATCGGCCTG CGGCTGTTCG ACCGCACGAC CCGCAAGCTG
GTGCTGACCG AGGCCGGACA GGAATATCTG GTCCATGCGC AGCGAATCCT GATCGAGGTC
GAGCACGCCC ATCTCAGCAC GACCGAACTG GTCGAGCGGA AACGGGGCAG GGTGGTGATC
GCCGCGCCGC CGATCATGGC GGCGGCGCTG CTGCCGGAGA TCATCGCGGA CTATCACCGG
AGCTATCCGA ACATCTCGAT CGTGGTCGAG GACATGCCGC CGGCCGAGAT CGTTCCGGCG
GTCGCCTCGG GGCAGATCGA CTGCGGGATC GGCGTGTTCG GCGATACGCC GGACGGGGTG
AAGGCGGTCG CCGTGCTGAA GGAGCGGATG CTGATCATCG CCAAGGCGGG CAATCCGCTG
CTGGCGCGGC CGACGCTCCG CTGGTCCGAT CTGCGCGGCC AGCCGGTCGT GGCGATCAAG
GGCGGCGCGC AGATCCGGCG CGAGGTCGAC GTCCGGCTGC GGCTGGCGCG GATCACCGAG
GAGCCGGTGA TCGAGGTCCG GCAGATGCTC ACCGTGCTCG GCATGGTGTC GGCGGGACTG
GGGGTGGCGG TGTGGCCGTC CTGGGCGAGC ATGTTCCTGG CGCCGTTCGG CGTCGAGGGG
CGGCCGCTTG CCGATGCAGC GCCGCAGCTC GACGTCGCGG TGGTCACGCC CAGCAGCCGT
GGCCTGTCGC CGGCCGCGAC CAGTTTTCAC GCCATGCTGA CGGCCAATAT CGGGCGCGTC
GTCGCGGAGG TCGAACCCTC CGCCTAG
 
Protein sequence
MAPLNVTLKQ IRAFVAAADT GSLTTAAVVV NSTQSSLSVL IRELEEAIGL RLFDRTTRKL 
VLTEAGQEYL VHAQRILIEV EHAHLSTTEL VERKRGRVVI AAPPIMAAAL LPEIIADYHR
SYPNISIVVE DMPPAEIVPA VASGQIDCGI GVFGDTPDGV KAVAVLKERM LIIAKAGNPL
LARPTLRWSD LRGQPVVAIK GGAQIRREVD VRLRLARITE EPVIEVRQML TVLGMVSAGL
GVAVWPSWAS MFLAPFGVEG RPLADAAPQL DVAVVTPSSR GLSPAATSFH AMLTANIGRV
VAEVEPSA