| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1782 |
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| Symbol | |
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| ID | 5200566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1996587 |
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| End bp | 1997450 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581329 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001262282 |
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| Protein GI | 148554700 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0988363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG ACCACCAGGC CGACCTCACC CTTGCCGTCG AGCTCGCCAT GGCCCGGACG
CCGGACCCTC GCCTTCGCGA GGTGATGGCC GCGCTGGTGC GCCACGCCCA CGCCTTCGTC
CGCGAGGTGC GGCCGACCGA CGAGGAGTTC GAGCGCGGCA TCGATTTCCT GATCGGCATC
GGCCAGGCCA CCGACGAGAA GAAGAACGAG GTGGTGCTCG CCGCCGACGT GCTCGGCATA
TCCAGCCTCG TCGGGCTGCT CAACAAGCCG CTCGACGGCG TCCGCACCGC GCCCGCGCTG
CTCGGTCCCT TCTGGCGGAG GAACGCGCCC GAATGCGCGC CGGGCGACAG CATCGTCCGC
TGCGCGGTGG AAGGGGAACG GCTGCTGGTG CGCGGGTCCG TCCGCGATCC GGCCGGCCGG
CCGATCGCCG GGGCCCGCAT CGACGTCTGG CAGGCGTCGC CGGTCGGGCT CTACGAGAAT
CAGGACGACG GCCAGCCGGA GATGAACCTT CGCGGCCTGT TCACCGCCGA CGCGGCGGGC
GCCTATCATT TCGAGACGGT TCGCCCGGCC GGCTATCCGG TCCCGACCGA CGGTCCGGTC
GGCGATCTGC TGCGGGCGCA GCGCCGCCAT CCCTATCGGC CGGCGCACAT CCATTTCATG
GTGACGGCGC CGGGCCATGC GACCCTCGTC ACCCAGATCT TCGCCGACGA GCAGGACCGC
CTCGAAACCG ACGTGACCTT CGGCGTGCTC GAGCCGCTCG TCGCCCGCTT CGAGCCGAAG
GAGGGCGGCA ATCTCCAGGT GCTGCGCTGC GACTTCGTGC TCGAAGCGGG CGAGACGCGC
ATTCCCAAGG CGCCGATCCC ATGA
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| Protein sequence | MIIDHQADLT LAVELAMART PDPRLREVMA ALVRHAHAFV REVRPTDEEF ERGIDFLIGI
GQATDEKKNE VVLAADVLGI SSLVGLLNKP LDGVRTAPAL LGPFWRRNAP ECAPGDSIVR
CAVEGERLLV RGSVRDPAGR PIAGARIDVW QASPVGLYEN QDDGQPEMNL RGLFTADAAG
AYHFETVRPA GYPVPTDGPV GDLLRAQRRH PYRPAHIHFM VTAPGHATLV TQIFADEQDR
LETDVTFGVL EPLVARFEPK EGGNLQVLRC DFVLEAGETR IPKAPIP
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