| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1775 |
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| Symbol | |
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| ID | 5200770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1986960 |
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| End bp | 1989992 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581322 |
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| Product | amidohydrolase |
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| Protein accession | YP_001262275 |
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| Protein GI | 148554693 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system
[COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0563559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGG GACTGGTACG ATTGCATCAC ATGGCGGCGC TCGGTGGCGC GCTCGGCTGG
TCCTCGCTCA TCGCGGCGGC TTCCCCCGCC GTCCCTTCCC GGACCTTCAC GGTGCGGGAA
GGGACCAATT TCACCGCGGC GATGTCGCCC GACGCGACGC GGATCGCGAT CGACCTGCAG
GGCGAGCTGC GCATCCTGCC GGCCAAGGGC GGCAAGGCGG TGGTGGTGCC GGGGCTGAGC
GGCGAAAGCC GCCTGCCGAG CTGGTCGCCC GACGGCAAGC TGATCGCCTT CCAATATTAT
CTCGGCGGCT ATTGGCACAT CTTCACGGTG AAGCCCGATG GCAGCGACCT CCGACAGCTC
AGCTTCGGCG CGGCCGACGA TCGCGAGCCG GTCTGGTCGG CCGACGGGCG CTCGATCCTG
TTCGCGTCGG ATCGCGCCGG CAATTTCGAC ATATGGTCGG TCGGGCTCGA CCGCGCCGCG
CCGGTCCAGC TCACCCGCGC GCCGGAGGAC GAATATAGCC CGGCCGTTGC GACGGACGGC
CGGATCGCCT TCGTCGCCAC CGCCGCGAAG GGCAGCGAGC TGCGGCTCCG TTCGGTCGAC
GGCGCGGTCC GCGTCGTGAC CGCCGATCCG TCGCGGATCG CGCTGCCCGC CTGGAGCGGG
GACGGCAGCT CGATCGCCTA TGTCGCCTAT GCCAGCGGTC GCCTCGGACG GCGCGGCGAG
GCGAGCCTCC ATGTCGCCGA CGCGACGAGC GGCAAGGATC GGCTGGCGAG CGCGGCGGGC
GAGGACGTCT TCGTGGCGCG CCCGCAATCG CTGCCCAGGG GCGGATGGCT CTACACCGCC
GACGGCGTGA TCAAGCGCCA GGGGACGGGC GCCGCCGCGA CGATCCCCTT CGCGGCCGAT
TTCATCGTCA CCCCGGCGCC GGCCTATGCC CGCAAGCGGC ATGATTTCAC CTCGACCGCG
CCGAAGCCGG TCAAGGGCAT CCTCCATCCG GTCGTCTCGC CGGACGGCAA ATATGTCGCC
TTCACCGCGC TGAGCGACCT CTGGCTGCTC AAGATCGGCG ATCCCAAGCC GGTGCGGCTG
ACCAACGATC CGTTCGTCGA CATCGACCCG GCCTGGTCGC CGGACGGCAG CCGCCTCGCC
TACACCTCCG ATCGGCGCGG GGTGGGGACG ATGGACCTCT ATGTCCGCGA CATGGCGAGC
GGGCGCGAGG AGCGGCTGAC CGAGACGACC GAGAGCGTCG CCGCCCCGGT CTTCTCGCCG
GACGGCAAGT CGATCGCGCT GACGATGCTC GCCTCGGACG ACTGGCACGC CAATTTCCCC
AATATCGTCG ATCTCCAGAC CAAGGAGATC CGCAAGATCC ATGGCTGGAC CTTCAAGCCG
AGCGTCGGAA GCTGGTCGCC CGACGGCAAA TCGGTCAACT ATGTCGTCCT TGCCGAGAAA
TCGGACCGTT TCCGCCACGG CCTGAACGAG ATCATGCGCG TCCCCGTCGA CGGCGGCGAG
CAGCGGCTGA CGTCGCCGAT CCCCGGCAAG TCGCTGGGCA TCCGCGCCAA GGACGGCGCG
ATCTATTCGC CCGACGGCAC CCACATGGCG TTCGTGGCCG ACGGGGTGCT GTGGACGGTG
GCGACCGACC GGCACGGCGA CTTCATCGAT TCGCCCCGGC GGATGACCAA CGACCTCGCC
GACGAGCCGA GCTGGGCGGG GGATTCGCGC AGCATCGTCT ACCAGTCGGC CGACAAGCTG
AAGCGCATCT GGCTCGACGA CGCGCATATC GAGGACATCC CGCTCGACCT GAGCTGGACC
AACGCCATCC CGCGCGGGCG CAAGGTGATC CATGCCGGCC GCCTGTTCGA CGGCGTCGGC
CAGGCCTATC GCAGCGATGT CGACATCGTC GTCGACGACA ATGTCATCAC CGCGGTCGAG
CCGCATCGCG GCGACCGGAC CGGCGTCGAA TGGATCGATG CGAAGGACAA GGTCGTCATC
CCGGGGATGT TCGAGAACCA CATCCACAAT TTCATCATCA ACGGCGAGCA GACCGGCCGC
ATCGCGCTCG CCTTCGGCAT CACCTCGATC CGCGAGCCGG GGGCCGAGCC GAGCGAGGGG
CTGGAGGCGA AGGAAGCCTG GGCGAGCGGC GCGCGCGCCG GCCCCCGGCT GTTCACCACC
GGGCTGATCG AGGGGCCGCG GCTCTATTAT CCGATGTCGA TGCCGGTGGG ATCGCGGCCG
GCGCTCGAAC TCGAGCTCGA ACGCGCGGCA CGGCTCGACT ATGATTTCAT CAAGACCTAC
GAGCGGCTCG ACAACGCCTA TCTGCGCCGC GCGGTCGAGG CCGCCCACGC GATCGGCATC
CCGATCACCT CGCACGATCT CTATCCCGCC ACCACCTTCG GGGTCGACGC GATCGAGCAT
CTGGTGACGG GCGACCGCAT CATCGTCGGC GATCGCCTGT CGATCAGCGG GCGGATCTAT
GACGATGCGC TCCAGCTCTA CCGCCAGTCC GGGATCGACG TGGTGCCCAC CGCGGCGGGC
GCCGATCCGC GCGCCGGCGC CTATTATCTC GCCCGGCAGG GCAAGTCGCT GCGCGACGTG
CGGCAGATGA GGATGCTCGC CCCGCGCATA TTGGCGTCGC GCTATCTGAA GTCCGCGCTC
GATGGCAAGG GGCTCGCCGA TCCGAGCCTC GAATCGGCGA AGCCCAGCCC GGTGACGCGC
CTTCATCAGG CCGGGATCAG CACCCCGCCG GGCACCGACA CCTCCTTCTT CAACCTGGGG
TTCGGGATCG TCGGCGAGCT GCAATATTAT GTCGACCAGG GCTTCACCCC GGCCGAGGCG
CTGCGATCGG CGACGTTCGA ATCGGCGCGG CTCAGCAAGG TCGAGGACCG GCTGGGCAGC
ATCGCGCCCG GCAAGCTCGC CGACATGGTG ATCGTCGGCG GCGACCCGCT CGCCAACGTG
ATGGACGTCC TCAACGTCGA GCAGGTGATC AAGGACGGGC GGCTGTTCAG CTTCGATCAG
CTCGCGGCCG GCGCGGAACT GGGAAAGAAA TAA
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| Protein sequence | MKRGLVRLHH MAALGGALGW SSLIAAASPA VPSRTFTVRE GTNFTAAMSP DATRIAIDLQ
GELRILPAKG GKAVVVPGLS GESRLPSWSP DGKLIAFQYY LGGYWHIFTV KPDGSDLRQL
SFGAADDREP VWSADGRSIL FASDRAGNFD IWSVGLDRAA PVQLTRAPED EYSPAVATDG
RIAFVATAAK GSELRLRSVD GAVRVVTADP SRIALPAWSG DGSSIAYVAY ASGRLGRRGE
ASLHVADATS GKDRLASAAG EDVFVARPQS LPRGGWLYTA DGVIKRQGTG AAATIPFAAD
FIVTPAPAYA RKRHDFTSTA PKPVKGILHP VVSPDGKYVA FTALSDLWLL KIGDPKPVRL
TNDPFVDIDP AWSPDGSRLA YTSDRRGVGT MDLYVRDMAS GREERLTETT ESVAAPVFSP
DGKSIALTML ASDDWHANFP NIVDLQTKEI RKIHGWTFKP SVGSWSPDGK SVNYVVLAEK
SDRFRHGLNE IMRVPVDGGE QRLTSPIPGK SLGIRAKDGA IYSPDGTHMA FVADGVLWTV
ATDRHGDFID SPRRMTNDLA DEPSWAGDSR SIVYQSADKL KRIWLDDAHI EDIPLDLSWT
NAIPRGRKVI HAGRLFDGVG QAYRSDVDIV VDDNVITAVE PHRGDRTGVE WIDAKDKVVI
PGMFENHIHN FIINGEQTGR IALAFGITSI REPGAEPSEG LEAKEAWASG ARAGPRLFTT
GLIEGPRLYY PMSMPVGSRP ALELELERAA RLDYDFIKTY ERLDNAYLRR AVEAAHAIGI
PITSHDLYPA TTFGVDAIEH LVTGDRIIVG DRLSISGRIY DDALQLYRQS GIDVVPTAAG
ADPRAGAYYL ARQGKSLRDV RQMRMLAPRI LASRYLKSAL DGKGLADPSL ESAKPSPVTR
LHQAGISTPP GTDTSFFNLG FGIVGELQYY VDQGFTPAEA LRSATFESAR LSKVEDRLGS
IAPGKLADMV IVGGDPLANV MDVLNVEQVI KDGRLFSFDQ LAAGAELGKK
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