Gene Swit_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1773 
Symbol 
ID5200562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1983124 
End bp1983894 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID640581320 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001262273 
Protein GI148554691 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.287429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTG AAACGATCCT CGTCGAGACC GAGGGACCGG TCACGGTCAT CCGGCTGAAC 
CGTCCGCAGG CGCTGAACGC GATCGATACG CAGGTGCTGG CCGACCTGAT CGTCGCCTTC
CGGGCGTTCG ACGCCGATCC GGAGCAGCGC TGCGCGATCC TGACCGGCAG CGAGAAGGCC
TTCGCCGCCG GCGGCGACAT CAAGCAGATG CGGGAGAAGG GCTATGCCGA GATGTTCGGC
GAGGACGTCG ACGGCTGGAG CAGGGTCACC GGGACGCGCA AGCCGTGGAT CGCGGCAGTG
GCAGGCTTCG CGCTGGGCGG CGGCTGCGAG CTGGCGATGA TGGCCGACAT CATGATCGCC
GCCGACAATG CCCGCTTCGG CCAGCCCGAG ATCAAGCTGG GCGTCTGCCC CGGCATGGGC
GGGTCGCAGC GGCTCACCCG CGCGGTCGGC AAGTCGAAGG CGATGGACAT GTGCCTGACC
GGCCGGATGA TGGACGCGAC CGAGGCCGAG CGCGCCAATC TGTGCAGCAA GGTCGTGCCG
CTCGCCGATC TGATGGACGA GGCGATGAAG ATGGCGCAGG CGATCGCCGC GATGCCCCCG
CTCGCCGCCA TCGCCAACAA GGAGGCGGTC AACGCCGCCT TCGAGACCGG CCTCCACCAC
GGCCTGCTGT TCGAGCGCCG CAGCTTCAAC GGCCTGTGCG CCACCGACGA CAAGGCCGAG
GGCATGGCCG CCTTCGTCGA GAAGCGCCCC GGCGTCTGGA AAGGACGATA G
 
Protein sequence
MAFETILVET EGPVTVIRLN RPQALNAIDT QVLADLIVAF RAFDADPEQR CAILTGSEKA 
FAAGGDIKQM REKGYAEMFG EDVDGWSRVT GTRKPWIAAV AGFALGGGCE LAMMADIMIA
ADNARFGQPE IKLGVCPGMG GSQRLTRAVG KSKAMDMCLT GRMMDATEAE RANLCSKVVP
LADLMDEAMK MAQAIAAMPP LAAIANKEAV NAAFETGLHH GLLFERRSFN GLCATDDKAE
GMAAFVEKRP GVWKGR