| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1765 |
|---|
| Symbol | |
|---|
| ID | 5196818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1975469 |
|---|
| End bp | 1976791 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640581312 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001262265 |
|---|
| Protein GI | 148554683 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGC GGCAGTTCAT GATCAGCAGT TGCGGGGCCG CCAATGTGCT GATGGCGCTC
AACGCCGCCG GCGCGGCGGC CGGCGAGATC GGCGGCGTCT TCGCGCTCGC CCCCGACGCC
GCCGTCGACC CGGCGGCGGC GGCCGCCACG CTCGCCTCCG ACGATTTCAT ATTCGACGTC
CAGAACCATG CGGTGAACCC GACCGGCCCG TGGCGCCGGC GGGCGAGCGG GCTGCGTCTG
GCCAAGAGCA TGCGGGGGGC CACCGACGCG GGCAAGGCCT GGACCGCCGC CGACGACGAG
CTCGGCTATC TGAACCTTCT GGACGGCGAG CACTACGTCA AGGACGTGTT CCTCGATTCC
GACACGCAGA TGGCGGTGAT GAGCGTGCTT TCGGTCGACC ATGACGACGA GCCGCTGCCG
ATCCAGGACG CGGCCGCCGT CCGCGCGCTG GTCGACCGGC TGGGGTCGGG CCGGCGGCTC
CTCCTGCACG GCAAGATATT GCCCAACCAT GCCGGCGACC TCGACCGGAT GGAGGCCTTC
AAGACGCAAT GGGGCGTCTC GGCATGGAAG CTCTACACCC AGCTTCCCGG CGAAGGCAGC
AGCGGCTATC GCCTCGACGA CGAGGCGCTG ATGACGCCCT TCGTCGAGAA GTCCCGCCGC
CTCGGCATCG ACATCGTCTG CGCGCATAAG GGCTTCCGGT TCGGATCGGG CGACCCCGCC
TTCGCCACCT GCCACGACGT CGGCCGGGCA GCCCGGCTCT ACCCCGACAT GAAATTCCTC
ATCTACCATG GCGGCTACGA CAAGGACGGC ATCGAGGGCC CCTATGATCC CGACAGGGCG
GAGATCGGCA TCAATACCCT GGTGAAGTCG CTGCAGGACA ACGGGATCGC GCCCAACGCC
AACGTCTATG CCGAATTGGG CGCGACCTGG CGTCAGCTCA TGACGCGGCC CGACCAGGCC
GCCCATGCCT GGGGGAAGCT GCTCAAGCAT GTCGGCGAGG ACAATGTCCT GTGGGGCACC
GACTGCATCT GGTACGGTTC GCCCCAGGAC CAGATCCAGG CGTTCCGGGC CTTCCAGTTC
TCCGAAAGCT TCCGCGAGCG CCATGGCTAT CCCGAGCTTA CCCCCGCGCT GAAGGCGAAG
ATATTCGGGC TCAACGCCGC GCGGGTGTAC AAGGTCGACG TGCCCGGTAC GCGTCGGCGT
CTCGATCGCG ACGCCCTGTC GCTGGCCAGG GAAGGCTATC TGGCCGAAGC CGATCCGAGC
TTCCTGACCT ATGGTCCGAA ATCGATGGCC GAGTTCCGCG CCCTCCAGCG CTCAGGACAC
TGA
|
|---|
| Protein sequence | MSRRQFMISS CGAANVLMAL NAAGAAAGEI GGVFALAPDA AVDPAAAAAT LASDDFIFDV
QNHAVNPTGP WRRRASGLRL AKSMRGATDA GKAWTAADDE LGYLNLLDGE HYVKDVFLDS
DTQMAVMSVL SVDHDDEPLP IQDAAAVRAL VDRLGSGRRL LLHGKILPNH AGDLDRMEAF
KTQWGVSAWK LYTQLPGEGS SGYRLDDEAL MTPFVEKSRR LGIDIVCAHK GFRFGSGDPA
FATCHDVGRA ARLYPDMKFL IYHGGYDKDG IEGPYDPDRA EIGINTLVKS LQDNGIAPNA
NVYAELGATW RQLMTRPDQA AHAWGKLLKH VGEDNVLWGT DCIWYGSPQD QIQAFRAFQF
SESFRERHGY PELTPALKAK IFGLNAARVY KVDVPGTRRR LDRDALSLAR EGYLAEADPS
FLTYGPKSMA EFRALQRSGH
|
|---|
| |