Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1747 |
Symbol | |
ID | 5198503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1954609 |
End bp | 1956924 |
Gene Length | 2316 bp |
Protein Length | 771 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640581295 |
Product | TonB-dependent receptor |
Protein accession | YP_001262248 |
Protein GI | 148554666 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGCA CATTCGCGAT ATTGGTCACC GGCTTCTGCG CCACGAGCGC GCATATGGCG CTGGCCCAGA CGGCGGCGCC CGCCGCCGCG GCGGCGTCCG AGGTCGTGGA CGATACGTCC CAGGGGCTGG GTGACATCGT CGTCACCGCC CAGCGCCGCG AGCAGCGGCT CCAGGACGTT CCGGTGACGG TCAACGCCAT CTCCGCCCAG GGCCTCGAAC GGCAGGGCAT CACCAACACG GCCGATCTCA ACGCCGTGGT CCCCGGCCTG AACATCGCCA AGTCGAGCAC GGTCGTGCAG CCCTTCCTGC GCGGCGTCGG CACCGCGTCG CTGGTCCCCG GCAACGATCC GAGCGTGCCG CTCTACATCG ACGGCGTCTA TCATTCGGCG CCGGCCGCCC TGTTCTTCTC GTTCAACAAC ATCGAGCGCG TCGAGGTGCT CAAGGGGCCG CAGGGCACCC TGTTCGGCCG CAACGCCACG GGCGGCCTGA TCCAGGTCAT CACCAAGGAT CCGACCCAGG AGCTCTCGGG CAAATTCTCG CTCAGCTACG GCAATTACCG CGCGGTCAAC GCCACCGGCT ACATCAGCGG GGGCACCGAC ACGATCGCCG CCGACCTGGC CGTGGTCTAC AACAACCAGT CGAAGGGCTG GGGTCGCAAC ACCTACCAGG CGGGCGAGGG CGGGCCGATC GTCGTCGGCG GAACCACCTT CACCGATCGC AAGGTCAAGC GGGCCGCGGG CTACACCGAC GAGTTCGGCA TCCACAGCAA GATCGTCATG ACCCCCGGCG ACCGGACGAC GGTCAAGCTC AGCGGCATGT ACATCGATGT CGACACCAAC CAGAACCACT ATCGCCACCC GCTGCCGGGC CGGCTGCTCC CGGGGCCGCC GGGGCAGAAT CCCTACAGCT TCACGGGCGG CTTCTACGAC TATGACTCGG ATATCGAGTG GTTCAATCGC AACCATCAAT ATCTGTTCAC CGCGGAGGCC CAGCACGAGG CCGATTTTGC GACCATCAAG TCGATATCCT CCTATCTGAA GGCGAAGGCC GAGATTTCGG TGCCGTCGGA CGGCAGCCCG CTGATCTCGC GCGCCAGCAG CTTCGCGCAT CTGCGGTGGA AGACCTTCAC GCAGGAACTC CAGATCCTGT CGAACAAGGA CTGGGGCCCC TCCTGGCTCG AATGGATCGG CGGCCTCTAT TATCTGAACA GCCGCGCCGG CTATGATCCG CAGGAAGTGA CCTACGGCTA TCGCTACGAC GGCACGTTCA ACCGCTATTC GTTCCAGACC TCGGATTCGC TGGCGGCCTA TGGCCAGGCG ACCGCGAGCC TGACCCCGAC CACGCGCCTG ACCCTGGGCC TGCGCTACAG CAAGGACCGG CTGGCCGCCA CGCAATATCA GCTCGGCACC TCCGCCGTCC TGGGCGGCGG CAACGCCAAC GGCGCGGTCA CGATCCTCGT GCCCAAGGTG CGGACGACGT TCGACAAGAT CACCTGGCGC GTCGCGCTGG ACCAGCGGTT GACGCCCGAC GTGCTGCTCT ATGCCAGCGC CAGCCGCGGC TACAAGACCG GCGCGTGGAA CCATGGCGCG CTCTGCGCCA CGACGCCGCC GGTGGGCGTC GCTTGCAGCA ACCTGGTCTT GCCGACCCGG CCCGAGGTGC TCGACGCCTA TGAGATCGGC CTGAAGTCGG ACCTGTTCGA CAAGCGCCTG CGGTTCAACA TCTCGGGCTA TTATTATGAT TATTCGGACC TGCAGGTGCA GGCGGTGGTC GGCGTGCCGC CGATCAGCGT GCTCAACAAC GCCGCGTCGG CCCGGATGTA CGGCATCGAC GTCGAGACGG CCTTCCAGTT CAATCGCTAT CTGCGGATCT CGGCGAACGG CGCCTATCTC GACGCCAAGT ACAAGAAATA TCCGAACGCG GTCGGCTTCA TACCGCTGAC GGTGGCGCCC TATGCCAATT CGCAGATATT GTTCGACGCT TCGGGCAACA GGCTGCCCCG CGCCCCGAAG TTCACCAGCA CGGTCTCGGT CGACTGGACC ATTCCGACCG GCGCCGGCGA CGTGACGCTG ACGGGGAGCT GGTATTACAA CAACGGCTTC TACTGGGATC CCCAGGAGCG GCTGAAGGAG CGGGCCTACA GCCTCGTCAA CGGCCAGATC GCGCTCAAGG CGACCGACAA TCTCAGCCTG CGGATCTGGG GCCGGAACCT GCTCGACAAG AAATATTACA GCTACCAGAC CGCGACCAGC GCGGGCGACC AGGGCGCCCC GGCGGCCCCG CGCACCTACG GCCTCGCGGT GGACTTCCAG TTCTGA
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Protein sequence | MRSTFAILVT GFCATSAHMA LAQTAAPAAA AASEVVDDTS QGLGDIVVTA QRREQRLQDV PVTVNAISAQ GLERQGITNT ADLNAVVPGL NIAKSSTVVQ PFLRGVGTAS LVPGNDPSVP LYIDGVYHSA PAALFFSFNN IERVEVLKGP QGTLFGRNAT GGLIQVITKD PTQELSGKFS LSYGNYRAVN ATGYISGGTD TIAADLAVVY NNQSKGWGRN TYQAGEGGPI VVGGTTFTDR KVKRAAGYTD EFGIHSKIVM TPGDRTTVKL SGMYIDVDTN QNHYRHPLPG RLLPGPPGQN PYSFTGGFYD YDSDIEWFNR NHQYLFTAEA QHEADFATIK SISSYLKAKA EISVPSDGSP LISRASSFAH LRWKTFTQEL QILSNKDWGP SWLEWIGGLY YLNSRAGYDP QEVTYGYRYD GTFNRYSFQT SDSLAAYGQA TASLTPTTRL TLGLRYSKDR LAATQYQLGT SAVLGGGNAN GAVTILVPKV RTTFDKITWR VALDQRLTPD VLLYASASRG YKTGAWNHGA LCATTPPVGV ACSNLVLPTR PEVLDAYEIG LKSDLFDKRL RFNISGYYYD YSDLQVQAVV GVPPISVLNN AASARMYGID VETAFQFNRY LRISANGAYL DAKYKKYPNA VGFIPLTVAP YANSQILFDA SGNRLPRAPK FTSTVSVDWT IPTGAGDVTL TGSWYYNNGF YWDPQERLKE RAYSLVNGQI ALKATDNLSL RIWGRNLLDK KYYSYQTATS AGDQGAPAAP RTYGLAVDFQ F
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