Gene Swit_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1744 
Symbol 
ID5198500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1951035 
End bp1951991 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content70% 
IMG OID640581292 
Productalpha/beta hydrolase fold 
Protein accessionYP_001262245 
Protein GI148554663 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACA GGGAGGGGGA CAAGATGGCC GCGATGGCGC TGGCCCCCGT TTCCCGGCCC 
GTCCCGGTCC CGGAGGCCGA GGATGCGGGC GGCTGGCAAT TCGCCGATGC GCCGGCGCGC
AGCGTCATGG TCGACGGCGT CCCGATCAGC TACCGGCTGT GGGACGACGC GCCGGCCGGC
GCGCCGACGC TGCTGTTCCT GCACGGCTTC CGCGCCCATT CGCGCTGGTG GGATCATATC
GTTCCCTTCT TCCGCGACGG CTATCGCGTC GCGACGATGG ACTTCAGCGG CCTCGGCGAC
AGCGGCTGGC GCGATCGCTA CACGATGCGC GGCTTCGCGC GCGAGATATT GGCGGTGATC
GCCGACGCCG GCCTGGCGCC GGTCACGGTC GTCGCGCACA GCTTCGGCGG ATCGCCCGCC
GCCTTCGCCA GCATGATCGA TCCCGGGGCG ATCCGCCATG CCGTCATCAT CGACACGCGG
ATGATCCTGG CCGGCGTGCC CGATCCGCAG CCGATCGAGC TGCAGGCCTT CAACGCCAGC
AAGCGCATCT ACAAGGACAT GGACGAGGTG CGGGGCCGCT ACCGGCTGAT CCCCTCGTCG
GGCGCGGTCG ATGCCGGAAT CCTCGACCAT ATCGTCCGCC ATTCGGCGCG CGAGGACCGG
GGCGGCTGGA CCTGGAAGTT CGATCCGTCG TTCGATCCGC AGCTCACCGA CGATCCCGAT
CGGCTGGTGC CGCCCGGCGT CGCGATGCCG ATCGACTATA TCTATGGCGA CCGCAGCGGC
GTGATCACGC CCGAGCTGGC CGAGCTGATC GTGTCGCTGC TGCCGAACTG CCGCGCGCCG
ATCGTCATCC CGCACAGCGA CCATCATGTC CTGCTCGAGC AGCCGGTCGC GCTGGTGGCG
GTGGTGCGGG CGCTGTTGAT GCGCGGGCCT TTGCAGGCGG ACGGCGATCC GCGCTGA
 
Protein sequence
MLDREGDKMA AMALAPVSRP VPVPEAEDAG GWQFADAPAR SVMVDGVPIS YRLWDDAPAG 
APTLLFLHGF RAHSRWWDHI VPFFRDGYRV ATMDFSGLGD SGWRDRYTMR GFAREILAVI
ADAGLAPVTV VAHSFGGSPA AFASMIDPGA IRHAVIIDTR MILAGVPDPQ PIELQAFNAS
KRIYKDMDEV RGRYRLIPSS GAVDAGILDH IVRHSAREDR GGWTWKFDPS FDPQLTDDPD
RLVPPGVAMP IDYIYGDRSG VITPELAELI VSLLPNCRAP IVIPHSDHHV LLEQPVALVA
VVRALLMRGP LQADGDPR