| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1738 |
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| Symbol | |
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| ID | 5198396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1943908 |
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| End bp | 1945650 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581286 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001262239 |
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| Protein GI | 148554657 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.363684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGC AAATTTCCCC CGACCTGGTG ATCCGCAACG GACTGGTGGC CGACGGCCTG
GGGGCGCCGC TGCGGCGGGC GGACGTCGCG ATCAGCGGCG ACCGGATCGT CGCGGTGGGG
GAGGTCGGCG CGCGCGGCGC CGAGGAGATC GACGCCGCGG GCGCGCTGGT CACGCCGGGC
TTCGTCGACG TCCACACCCA TTATGACGGC CAGGCGGTCT GGGCGGAGCG TTTCTCGCCG
TCGTCGGCGC ATGGCGTGAC GACGGTGGTG ATGGGCAATT GCGGCGTCGG CTTCGCGCCC
TGCCGGCCCG AGGATCACGA GGTGCTGGTC AGCGTGATGG AGGGCGTCGA GGACGTGCCC
GAGATCGTCA TGACCACCGG GCTCGACTGG AGCTGGGAGA CCTTCCCGCA ATTCCTCGAC
ACGCTGGAGG GGCGGCCGCA CGACATCGAT TTCGGCGTCT ACCTGCCGCA CTCGCCGCTG
CGCGTCTATG TAATGGGCGA TCGCGGCGTC CGGCGCGAGG AGGCGCAGGA GGCCGATCTC
GACCGGATGC GCGAGATCAC GCGCGAGGCG ATGCGCGCCG GCGCGCTCGG CTTCGCCACC
TCCAGCGTCC CCGCGCACCG CACGGGGCAG GGCGAGTTCA TCCCGTCCTT CCAGAGCGCC
GAGGCCGAGT ATCTCGCCAT CGCGGGCGCG ATGACCGACA CCGGGCGCGG CGTGTTCCAG
ATGGTGCTCG ACCAGCGCAA CCCGGCCGAT GCGGAGCGCT TCGTGCCGAT GCTGGAGCGG
ATCAGCGACC GGACCGGCCG CACCGTCACC TTCACCCTCA CCCAGATGAT GGATGGCCCG
CCCGACGCCT ATCGCAGCGT GCTCGCGGCG GTGAGCGAGG CCAACCGCAA GGACGGCGTC
GAGATCCGGC CGCAGGTCTT CCCCCGGCCG ATGGGCATGC TGCTCGGCAT CGATCTGACG
CTCAACCCGT TCAGCCTGTG CCCGAGTTAC GAACCGCTGC TGAAGCTGTC GGTGCCCGAT
CGGGTGGCGG CGCTGCGCGA TCCCGACCTG CGCGCGCGCC TGCTCGTCGA GCAGCCCAGC
GATCCGAAGA ACCCGCTGTT CGTGATCGCC CGCGATTGGA AGCGGCTCTA TCCGTTCCGC
ACCCCGGCCG ATTATGAGCC GCCCAAGAGC ACGAGCATCG CCGCGCTCGC CGCGCAGACC
GGCCGCTCGC CGGAGGACAT CGCCTATGAC CTGCTGCTGG AGAATGACGG CGCGGGCATG
ATCCTCGCCG CGATCACCAA CTATGCCGAG GCGACGCTCG ACGCGGTGTT CGAGATGATC
ACCCATGAGG ACACGGTCGT CGCGCTGGGC GACGGCGGCG CCCATTACGG GCTGATCTGC
GACGCCAGCT TCCCGACCTT CATGCTGACC CACTGGGCGC GCGACCGCGA CAGCCAGAAG
ATCGAGCTGA GCGATGCGGT CGAGGCGCTG ACCTCGCGGC CGGCGCGGCT GGTGGGACTG
GAGGATCGCG GCGTGATCGC GCCCGGCTAC AAGGCCGACA TCAACATCAT CGATCTCGAT
CGCCTCCAGC TCAGGATGCC GCATATCGAC CGCGACCTTC CGGGTGGCGG CCGCCGGCTC
AACCAGGGCG CGGTCGGCTA TCGGGCGACG CTGGTGTCCG GCAAGGTGAT CCAGCGCGAC
GGCGTGCCGA CCGACGCGCT GCCGGGCCGG CTGATCCGCG GGCCGCAGCC GCTGACCGCC
TGA
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| Protein sequence | MSQQISPDLV IRNGLVADGL GAPLRRADVA ISGDRIVAVG EVGARGAEEI DAAGALVTPG
FVDVHTHYDG QAVWAERFSP SSAHGVTTVV MGNCGVGFAP CRPEDHEVLV SVMEGVEDVP
EIVMTTGLDW SWETFPQFLD TLEGRPHDID FGVYLPHSPL RVYVMGDRGV RREEAQEADL
DRMREITREA MRAGALGFAT SSVPAHRTGQ GEFIPSFQSA EAEYLAIAGA MTDTGRGVFQ
MVLDQRNPAD AERFVPMLER ISDRTGRTVT FTLTQMMDGP PDAYRSVLAA VSEANRKDGV
EIRPQVFPRP MGMLLGIDLT LNPFSLCPSY EPLLKLSVPD RVAALRDPDL RARLLVEQPS
DPKNPLFVIA RDWKRLYPFR TPADYEPPKS TSIAALAAQT GRSPEDIAYD LLLENDGAGM
ILAAITNYAE ATLDAVFEMI THEDTVVALG DGGAHYGLIC DASFPTFMLT HWARDRDSQK
IELSDAVEAL TSRPARLVGL EDRGVIAPGY KADINIIDLD RLQLRMPHID RDLPGGGRRL
NQGAVGYRAT LVSGKVIQRD GVPTDALPGR LIRGPQPLTA
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