Gene Swit_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1736 
Symbol 
ID5196547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1942203 
End bp1943339 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content69% 
IMG OID640581284 
Productaldo/keto reductase 
Protein accessionYP_001262237 
Protein GI148554655 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGGA CGGAGGCGAT GCGCTACGCC CTGCTCGGCG ACACCGGCCT GTTCGTGTCG 
CGGCTGTCGC TGGGCGCGCT GACCTTCGGC GCGCAGGAGG GCGACGGGCT CTACCAGATG
ATCGGCAATC TCGATCAGCC GGCGGTCAAC CGCATGGTCG CGCATGCGAT CGACAAGGGC
GTCAACCTGA TCGACACCGC CAACGTCTAC GCCGACGGAC GGTCGGAGGC GGCGATCGGC
CAGGCGCTCA GAGACCTCGG CATTCGCCGG TCGGACATGA TCATCGCCAC CAAATTCTTC
AGCCGCACCG GCGCGGGGCC CAACGACATC GGCGGCAGCC GCGCCCATAT CATGGCGTCG
GTCGAGGCCA GCCTGAAGCG GCTCGGCACC GATCATATCG ATCTCTACCA GATGCACGGG
CAGGACCCGA TCACGCCCGA GGAGGAGACG CTGCGCGCGC TCGACGATCT CGTCGCGCGG
GGGATGGTCC GCTATGTCGG CTGCTCGAAC TGGCAGGCGT GGAAGCTGAT GAAGGCGCTC
GCCGTCTCGG ACCGCCGCGG CCTGACGCGC TTCCAGTCGC TGCAGGCCTA TTATTCGATC
GCCGGGCGCG ACCTGGAGCG CGAGATCGCG CCGCTGATCC AGGACCAGAA GATCGGGCTG
ATGGTCTGGG GCGCGCTCGC CTGGGGCCTG CTGTCGGGCA AATATCGGCG CGACGGCGGT
GATAGCGGCG GGGGCGGGGG CGAGGGGCGG CGCGCGCAGC TCGACTATCC GCCGGTCGAT
CGCGAGCGCG CCTGGGCCTG CATCGACGAG ATGCGCGCGA TCGGCGATGC CCATGGCGTG
TCGGTGGCGC GGGTCGCGAT CGCCTGGCTG CTCAGCAAGC CCTATGTCAG CACGATCGTC
GTCGGCGCGA AGAGCCTCGA ACAGCTCGAC GACAATCTCG CCGCGATGGC GCTGGAACTG
GACGCCGACG AACTGGCCCG GCTGGATGCG GTCAGCGCCC TGCCGCCCGA ATATCCGGGC
TGGGCGGTCG ACCTGATGAA CAAGACCCGG CTGCCGCAGC CCGGACAGGG CCCCGGCGGC
CTCGGCGACC GGCTGCGGCA GTCGGCCGCC GACAATGGCG GATCGGCGCC ATGCTGA
 
Protein sequence
MSGTEAMRYA LLGDTGLFVS RLSLGALTFG AQEGDGLYQM IGNLDQPAVN RMVAHAIDKG 
VNLIDTANVY ADGRSEAAIG QALRDLGIRR SDMIIATKFF SRTGAGPNDI GGSRAHIMAS
VEASLKRLGT DHIDLYQMHG QDPITPEEET LRALDDLVAR GMVRYVGCSN WQAWKLMKAL
AVSDRRGLTR FQSLQAYYSI AGRDLEREIA PLIQDQKIGL MVWGALAWGL LSGKYRRDGG
DSGGGGGEGR RAQLDYPPVD RERAWACIDE MRAIGDAHGV SVARVAIAWL LSKPYVSTIV
VGAKSLEQLD DNLAAMALEL DADELARLDA VSALPPEYPG WAVDLMNKTR LPQPGQGPGG
LGDRLRQSAA DNGGSAPC