Gene Swit_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1733 
Symbol 
ID5196544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1938451 
End bp1939257 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID640581281 
Productmetal-dependent hydrolase-like protein 
Protein accessionYP_001262234 
Protein GI148554652 
COG category[R] General function prediction only 
COG ID[COG3687] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC TCGTTCATCG TCAGCCCAAT ATCGATTTCA CCGGCGTGCC CGCGCGTTGG 
ACGCGCAACA TCGAGTTCGC GTCGCTGTTC ACCGCCGGTT CGGCGGGCGC GCCGGCGGTG
GAGCCCTATC TCAACCAGAT CATGGCGCAG GCCAAGCCGC TGCTGAAGCC GAAGGACCGG
CACCTCGCGC CCGAGATCGA CCTGTTCATC AAGCAGGAGA CGACCCATTA CAAGGTGCAC
AACGCCTATA ATGCCGAGAT CCGCAAGACC TACCCCTTCC TGAAGGAGGC GGAGGAGGCG
AAGCGCGCCG ATTACCGCGG TTTCCTGGCC AACAGGTCGC ACAAGTTCAA CTGCGCCTAT
GCCGCCGCGT TCGAGACGCT GGCGCTCAGC ATGGCGCTGT TCCTGTTCGA GGAGGCGGAC
GACCTGATCG CCGATGCCGA CCCGCGGACG ATCGCCATGT GGCGCTGGCA CCTCGGCGAG
GAATATGAGC ATCGCTCGGT CTGCCACGAC GTCTATTGCG CGATCTACGG CGACTGGTTC
TTCCGCGCGA AGATGGTGAT CTTCACCTAT CGCCACCTCG CCGCGCACAA CAGGCGCATC
ATGGGCGCCC TGCTCCAGCA GGAACGGGCC GCGATGACGC CCGAGGAACT CGAACGCTCG
CTCGCCCGCC AGCAGGATTT CATGAAGCGC TTCCGGTCCT TCCACCTGCC CCGGATCATC
CGGCTGCTGA TGCCCGGCTA TAATCCCGGC AAGGCCCGTG CGCCGCGCGG ACTGGAGGCC
GCGCTCGGCC TGTACGCGCC CGGCTGA
 
Protein sequence
MTQLVHRQPN IDFTGVPARW TRNIEFASLF TAGSAGAPAV EPYLNQIMAQ AKPLLKPKDR 
HLAPEIDLFI KQETTHYKVH NAYNAEIRKT YPFLKEAEEA KRADYRGFLA NRSHKFNCAY
AAAFETLALS MALFLFEEAD DLIADADPRT IAMWRWHLGE EYEHRSVCHD VYCAIYGDWF
FRAKMVIFTY RHLAAHNRRI MGALLQQERA AMTPEELERS LARQQDFMKR FRSFHLPRII
RLLMPGYNPG KARAPRGLEA ALGLYAPG