Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1727 |
Symbol | |
ID | 5196587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1930574 |
End bp | 1932394 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640581275 |
Product | phosphogluconate dehydratase |
Protein accession | YP_001262228 |
Protein GI | 148554646 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC ACGCGGCGGT GGAGGCGGTG ACGTCTCGGA TCGTGGAGCG GTCGCGGGTG GGCCGTCGGG CCTATCTGGA GCTGATCGCG CGCGAGCGGG ATACGGGGGT GGACCGTCCG CGGCTGTCGT GCGGCAACCT GGCGCACGGC TTCGCGGCGT CGGGAGAGGA CAAGCCGGCG ATCCGCGAGG GGCGGGCGAT GAACATCGGC ATCGTCACCG CCTATAACGA CATGCTGTCG GCGCATCAGC CCTATGGCGG CTATCCGGAC CGGATGAAGC TGTGGGCGCG CGAGGCGGGG ATCACGGCGC AGGTGGCGGG CGGGGTTCCG GCGATGTGCG ACGGGGTGAC GCAGGGGCAG CGCGGCATGG AGCTGTCGCT GTTCAGCCGC GACACGATCG CGCTGTCGAC GGCGGTGGCG CTGAGCCACG GCATGTTCGA GGGCGCCGCC CTGCTCGGCA TCTGCGACAA GATCGTCCCC GGGCTGCTGA TCGGGGCGCT GCGCTTCGGC CACCTGCCGA CGATCCTGGT GCCGGCCGGA CCGATGCCCT CGGGGCTCGC CAACAAGGAG AAGCAGCGCG TCCGCCAGCT CTATGCCGAG GGCAAGGCCG GCCGCGCCGA GCTGCTCGAG GCGGAGAGCG CCTCCTATCA TGGCGCGGGC ACCTGCACCT TCTACGGCAC CGCCAATTCG AACCAGATGA TGATGGAGGT GATGGGCCTG CACATGCCGG GCGCCGCCTT CGTCAACCCG GGCACGAAGC TCAGGCAGGA ACTGACCCGC GCGGCGGTCC ACCGGCTGGG GGAGATCGGC TGGGACGGCG GCGACTATCG GCCGCTGGGC TTGTGCGTCG ACGAGAAGGC GATCGTCAAC GCGGCGGTCG GGCTGCTGGC GACCGGGGGC TCGACCAACC ATGTCATCCA CCTGCCCGCG ATCGCGCGGG CGGCGGGGAT CATGATCGAC TGGGAGGACA TCGACCGGCT GTCGGCGGCG GTGCCGTTGA TCGCGCGGGT CTATCCCAAC GGCGCGGGCG ACGTGAACCA TTTCCAGGCG GCGGGCGGCA TGGCCTATGT GATCGCGACG CTGCTCGACG GCGGCTATCT CCACCGCGAC ATCCTGACCG TGGCGGGCGA CGATCTCGGC GCCTATGCGC GGGAGCCGCT GCTCGACGGC GAGGCGCTGG TCTGGACCGA CGCGCCCGCC GCGCCGCTCG ACCCGGCGAT GCTGCGGTCG CACGCCGATC CCTTCCAGCC CGATGGCGGC ATGCGGCTGG TGCGGGGCAA TCTCGGGCGC GGCACCTTCA AGACCAGCGC GGTCGATCGG TCGCGCTGGA CGATCGAGGC GCCGGTGCGG CTGTTCGACG ACCAGGACCA GGTGACGGCG GCGTTCAGGG CGGGCGAGCT CGACCGCGAC GTGGTGGTGG TGGTGCGCTT CCAGGGCCCG AGGGCGAACG GCATGCCCGA GCTGCACAAG CTCACCCCGC CGCTGGGCGT GCTCCAGGAC AAGGGCCACA AGGTGGCGCT GGTGACCGAC GGTCGGATGT CGGGGGCCTC GGGCAAGGTG CCCGCCGCGA TCCACCTGAC CCCGGAGGCG TTCGCCGGGG GCCCGATCGC GAAGCTCAGG GACGGCGACG TCGTCCGGCT GTGCGCCGAG CGGGGCGAGA TACTGGCGCT GGTCGACGCG GCCGAATGGG AGGCGCGCGA GCCTGCCGCC CCACCGCCCC GGCAGCCCGG CACCGGCCGC GAGCTGTTCG CCTTCATGCG CGCCGGCGCC GACACCGCCG AGCGCGGCGC CTCGGCCATG CTCGACGCAG CAGGGTTGTG A
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Protein sequence | MSLHAAVEAV TSRIVERSRV GRRAYLELIA RERDTGVDRP RLSCGNLAHG FAASGEDKPA IREGRAMNIG IVTAYNDMLS AHQPYGGYPD RMKLWAREAG ITAQVAGGVP AMCDGVTQGQ RGMELSLFSR DTIALSTAVA LSHGMFEGAA LLGICDKIVP GLLIGALRFG HLPTILVPAG PMPSGLANKE KQRVRQLYAE GKAGRAELLE AESASYHGAG TCTFYGTANS NQMMMEVMGL HMPGAAFVNP GTKLRQELTR AAVHRLGEIG WDGGDYRPLG LCVDEKAIVN AAVGLLATGG STNHVIHLPA IARAAGIMID WEDIDRLSAA VPLIARVYPN GAGDVNHFQA AGGMAYVIAT LLDGGYLHRD ILTVAGDDLG AYAREPLLDG EALVWTDAPA APLDPAMLRS HADPFQPDGG MRLVRGNLGR GTFKTSAVDR SRWTIEAPVR LFDDQDQVTA AFRAGELDRD VVVVVRFQGP RANGMPELHK LTPPLGVLQD KGHKVALVTD GRMSGASGKV PAAIHLTPEA FAGGPIAKLR DGDVVRLCAE RGEILALVDA AEWEAREPAA PPPRQPGTGR ELFAFMRAGA DTAERGASAM LDAAGL
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