| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1719 |
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| Symbol | |
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| ID | 5197957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1920609 |
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| End bp | 1922675 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581267 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001262220 |
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| Protein GI | 148554638 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTG CAACCGACGT TGGCGGCACC TTCACCGATC TGGTCTGCTA CGATGTCGAC
AAGGCGAGCG GCAAGGTCGT CGGGCTGCGC ACCGCGAAGA CCGACACCAC CTATCCGCAG
TTCGACGAAG GGGTGATGAA CGCGGTCGCC AAGGCCGGCC TCGATCCCAG GAGCTTCGAC
TTCTTCGCGC ACGGCACCAC GGTGGTGATC AACGCGCTGC TGTCGCGCAA GGGCGCCAGG
ACCGCGCTGA TCACCACCAG GGGCTTTCGC GACGTGCTCG AGATCGCGCG CGGCAACCGG
CCCGACCTGT TCAACCTCGC CTTCCGCAAG CCGGCGCCGT TCGTGCCGCG CTACCTGCGC
CGCGAGGTGG ACGAGCGCAG CACCTATCTG GGCGAGGTGA CGACCGCGCT CGACCCCGCG
ACGCTCGATC CGATCCTAGC CGATTTCCGC GCCGAGGGGG TGGAGGCGAT CGCGCTCTGC
TTCCTCCACG CCTATGTCGC GCCGGAGAAC GAGCGGTTGG CGCGCGACCA TATCCGCCGC
GTCTGGCCCG AGGTCTCCGT GATCGCCTCG CACGAGATCT CCCGCGAGTG GCGCGAATAT
GAGCGGACCT CGACCGCGGT GCTGACCGCC TATGTCCACC CGGCCGCGCA ACGCTACCTG
CGGACGCTGC AGCGCAGCCT CGACGGCGCC GGCTATCCGC ACGCGCCCTA TATCATGCAG
TCGAACGGCG GCATCGACAC CGTCCAGGGC GCGATCCGCA ACCCGATCGC GATGGTGGAA
TCGGGGCCGG CCAGCGGCGT GCTGGGCGCC GCCGCGCTCG GCCGGCTGCT GGGCGAGGAC
CGGATCATCG CGCTCGACAT CGGCGGTACC ACCGCCAAAT GCTCGCTGAT CGAGAAGGCG
CAGACCCGGA TCACCACCGA ATATCGGATC GAATGGTCGC GTACCGAACC CGGTTATCCG
ATCCGCACGC CGGTGATCGA GATCGTCGAG ATCGGCAATG GCGGCGGATC GATCGCCGGC
ATCGATCCGG GCGGGCGGCT CTATGTCGGG CCGGAAAGCG CCGGCGCCTC GCCGGGACCG
GCGGCCTATG GCCGGGGCGG CACGCGGCCG ACCACGACCG ACGCCAACCT CGTCACCGGG
CGGATCAACC CGGCCAATTT CCTCGGCGGC GAGATCGTCC CGGACATGGC CAATGTGCGC
AAGGCCTTCG CGCCGCTGGT CGACAAGCTC GGCGGCGACA CCGCCTCGGT GGCGCGCGGG
ATCATCCGCA TCGCCAACGC CAACATGGTC AACGCGCTCA AGCTGGTGTC GCTCAACAAG
GGTCATGACC CGCGCGACTT CACCCTGGTC GCCTATGGCG GCGGCGGGGC GATGCACGCG
GTGATGCTGG CCGAGGAGCT GCAGATGCCG AAGGTGATCA TTCCGGTGAA CTCCTCGGTC
TTCTCGGCCT GGGGCATGCT GATGACCGAC ATGCGCCGCG ATTTCGTGCG CACCCAGGTG
GTCCTGCTGA CCCCCGGCAA CGGCGCGCGG ATCGAGGAGA TCTTCGCCAC CATGGCGGGC
GACGCGCGGG AAAGCTTCGC CGCCGACGTC GCCACCGGCG CTGCGCCGCT GCGCATCCTG
CGGTTCGCCG ACATGCGCTA TCTGGGCCAG GAGCACAGCG TGAAGGTGGA GCTTCCCGAC
GGCGCCTTCG ACGCCGCGAC GCTCGCCGCC GCGATCGAGC GCTTCCACGC CACCCATGAA
CGCGAATATA CCTTCCGGCT CGACCTGCCG GTGGAGATCG TCAACTTCCA CGTCGTGGCG
TTCGGCGACG TGCCCAAGCA TGAGCCCGAG CGGCTCCCCG TCACCGGGCG CCTGCCCGCG
GAGGCGACCA ACGGCATCCG TACCGTCGAC CTCGACGAGC ATGGCGTCCA CGAGGCGCCG
ATCTACGATC GCGACCGGCT CGAACCCGGC ATGCGCTTCG CCGGCCCCTG CATCGTCGAG
GAGGCGGCGG CGACGCTGGT CGTCACCCCC GGCCGCCTCG TCGTCGTCGA CGATTACGGC
AACCTCCACG TTCACATGAA CGCCTAG
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| Protein sequence | MRVATDVGGT FTDLVCYDVD KASGKVVGLR TAKTDTTYPQ FDEGVMNAVA KAGLDPRSFD
FFAHGTTVVI NALLSRKGAR TALITTRGFR DVLEIARGNR PDLFNLAFRK PAPFVPRYLR
REVDERSTYL GEVTTALDPA TLDPILADFR AEGVEAIALC FLHAYVAPEN ERLARDHIRR
VWPEVSVIAS HEISREWREY ERTSTAVLTA YVHPAAQRYL RTLQRSLDGA GYPHAPYIMQ
SNGGIDTVQG AIRNPIAMVE SGPASGVLGA AALGRLLGED RIIALDIGGT TAKCSLIEKA
QTRITTEYRI EWSRTEPGYP IRTPVIEIVE IGNGGGSIAG IDPGGRLYVG PESAGASPGP
AAYGRGGTRP TTTDANLVTG RINPANFLGG EIVPDMANVR KAFAPLVDKL GGDTASVARG
IIRIANANMV NALKLVSLNK GHDPRDFTLV AYGGGGAMHA VMLAEELQMP KVIIPVNSSV
FSAWGMLMTD MRRDFVRTQV VLLTPGNGAR IEEIFATMAG DARESFAADV ATGAAPLRIL
RFADMRYLGQ EHSVKVELPD GAFDAATLAA AIERFHATHE REYTFRLDLP VEIVNFHVVA
FGDVPKHEPE RLPVTGRLPA EATNGIRTVD LDEHGVHEAP IYDRDRLEPG MRFAGPCIVE
EAAATLVVTP GRLVVVDDYG NLHVHMNA
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