| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1713 |
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| Symbol | |
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| ID | 5197986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1914004 |
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| End bp | 1915212 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581261 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001262214 |
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| Protein GI | 148554632 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC CCAACCGTCA GGACTATGCC CAGAAGGATC GGGGGCCCGC CGCGGCGCCC
TTCCAGGGCG TGAGGGTGAT CGAATTCTGC AACGTCGCGG CGGGGCCGTT CTGCGGGATG
CTGCTGGCCG ACATGGGCGC CGACGTCGTC AAGGTGGAGT CCAGGTCGGG CGACACGTTG
CGGCAATGGC CGCCCATCGT CGACGGGTTC AGCGAGAATT TCGCCTCGCT CAATCGGAAC
AAGCGCTCGA TCGCGCTCGA CCTCAAGGAC CCGGAGGACC GCGATGTCGC GAAGCACCTG
ATCGCGGCGG CCGACGTCGT GATCGAGAAC AACCGGCCCG GCGTGATGGC GCGGCTCGGC
CTCGGCTACG ACGCCTTCGC GCAGGACCAT CCCCGGCTGA TCTATTGCTC GCTGTCCGCC
TTCGGGCAGA GCGGTCCGCG CGCCGGGGAC GGTGGCTTCG ACGTCACCGT CCAGGCGATG
TCCGGGATCA TGAGCGTGAC GGGCGAGGCC GACGGCGCGC CGGTCAAGGC CGGCGTCCCG
GTCTCCGACT TCGCGACCGG GCTGTACGGC GCGTTCGCGG TGGCGTCGCT GCTGGCGCGG
GTGCGCGCGG GCGGCGAGGG CGGCCATGTC GACGTGTCGA TGCTCGGCAG CAGTCTGGCG
ATCTCGGCGC TGCAGGTCAG CGAGTTTTTC GGGAGCGGGC GCGATCCCGT CCGGCTCGGC
GCGGCGCATC CGCGCAACGC GCCCTATCAG GCGTTCCGCG CCGGCGACGG CGACTTCGTG
CTGGCCGCCG GCAACGACAA GCTGTGGCGG AGCGTCTGCG AGATCGTCGG CCGGATCGAT
CTGCTCGACG ATTCCCGCTT CCGCTCGACG CGCGACCGCG CGGCGCATCA GGGGGAGCTC
GCGGTCATCC TCAACGCCGC CTTTGCCGGC CGCAGCGTCG CTGACCTGCT CGCGGCGTTC
GAGGCGGCTG GCGTCCCGTG CAGCCGGATC AACAGCTATT CGGAGGCGCT CGCCGAGCCG
CAGGTCGCGC ATATGGGATG GGTCCGCGAG GTGGTGCTGC CGACCGGCAA GGCGAGCCGG
ATCTTCGGAT CGCCGATCGG TATCGGCAAC ACCCCCCATC GCATCCGGCA CGCGCCGCCG
GCGCTCGACG CGGATCGCGA GGATATCCTG CGCGAACTCG CGGCGACGCG GTTGCAGGCC
GCGTCATGA
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| Protein sequence | MKTPNRQDYA QKDRGPAAAP FQGVRVIEFC NVAAGPFCGM LLADMGADVV KVESRSGDTL
RQWPPIVDGF SENFASLNRN KRSIALDLKD PEDRDVAKHL IAAADVVIEN NRPGVMARLG
LGYDAFAQDH PRLIYCSLSA FGQSGPRAGD GGFDVTVQAM SGIMSVTGEA DGAPVKAGVP
VSDFATGLYG AFAVASLLAR VRAGGEGGHV DVSMLGSSLA ISALQVSEFF GSGRDPVRLG
AAHPRNAPYQ AFRAGDGDFV LAAGNDKLWR SVCEIVGRID LLDDSRFRST RDRAAHQGEL
AVILNAAFAG RSVADLLAAF EAAGVPCSRI NSYSEALAEP QVAHMGWVRE VVLPTGKASR
IFGSPIGIGN TPHRIRHAPP ALDADREDIL RELAATRLQA AS
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