Gene Swit_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1712 
Symbol 
ID5198738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1913423 
End bp1914007 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID640581260 
Productcysteine dioxygenase type I 
Protein accessionYP_001262213 
Protein GI148554631 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG GCGGACGGCC GCGCTTCGCC GCCTTCCTCG CCTTCCTGAC CGAGCAGGCG 
GAGGAGCGGG GGAAATCCGA GGCGGCGATC CTCGCCGAGA CCGCGCCGTA TCTGGCCGCG
CTGGTGGCCG AGGACGACTG GCTCGACGAG GCCTTTGCCC GGCCCGACGC CGGCCGCTAC
CAGCAGCACC TCCTGTTCTG CGATCCGCTG CGCCGGTTTT CGGTCGTCAG CTTCGTCTGG
GGGCCGGGAC AGGCGACGCC GATCCACGAC CATATGACCT GGGGCCTGGT GGGGATGCTG
CGCGGCGCCG AGATATCCGA GGGTTTCGCG CTGCGATCCG GCGTGCCGGT GAAGACCGGC
GAGGTCCGGC TGGAGCCGGG GGACGTGATC GCCCTCTCGC CCGCCGAAGG GGATATCCAC
CGCGTCCGCA ACGCCCATGC CGATCGCGTC TCGATCAGCA TCCATGTCTA TGGCGACGAC
ATCGGCCGGG TGGATCGGCA CATCTTCTCG CCCGAGGGCG ATGTGAAGGG CTTCGTGTCG
GGCTATTCGA ACGCGCTTCT CCCGAATCTC TGGGGGCGGG CGTGA
 
Protein sequence
MTQGGRPRFA AFLAFLTEQA EERGKSEAAI LAETAPYLAA LVAEDDWLDE AFARPDAGRY 
QQHLLFCDPL RRFSVVSFVW GPGQATPIHD HMTWGLVGML RGAEISEGFA LRSGVPVKTG
EVRLEPGDVI ALSPAEGDIH RVRNAHADRV SISIHVYGDD IGRVDRHIFS PEGDVKGFVS
GYSNALLPNL WGRA