| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1707 |
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| Symbol | |
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| ID | 5197496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1906477 |
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| End bp | 1908996 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581255 |
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| Product | assimilatory nitrite reductase (NAD(P)H) large subunit precursor |
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| Protein accession | YP_001262208 |
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| Protein GI | 148554626 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.795127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTC AGGGCACGGG CATCGGCGCC GAGAATCGCG ACGACGCTCC CGACACGGTC
GGGACGCAGC GGCTCGTCGT CATCGGCAAC GGCATGGCGG GCTGCCGCGC GGTCGAGGAG
ATATTGGCGC GCGATCCGGG CCGGTTCCGC ATCACCATCT TCGGCGCCGA GCCGCATGTG
AACTACAACC GGATCATGCT GTCGCCGGTG CTGGCCGGCG AGAAGAGCTT CGACGAGATC
GTGATCAACG ACGCTGCCTG GTATGCCGAC AACGGCATCG AACTGGTCGC GGGCGATCCG
GTCGCCGCGA TCGACCGCGC CGCCCGGACG GTGACCGCGA ACAGCGGCCG CACGGTCGGC
TATGACCGCC TGCTGATCGC GACCGGCTCC GATCCCTTCA TCATCCCGGT GCCCGGCAAG
GACCTGCCCG GCGTGATCAG CTTCCGCGAC ATGAAGGACG TCGACGCGAT GCTGGCGGCG
GCCGATCGAG GCGGCGACGC CGTCGTCATC GGCGGCGGCC TGCTGGGGCT GGAGGCGGCG
CACGGCCTCA GCCTGCGCGG CATGAAGGTG ACCGTGCTCC ACCTGATGCC GACCCTGATG
GAGCGCCAGC TCGACGAGGC GGCCGGCTGG CTGCTCAAGA CCGAACTGGA ACGGCGCGGC
CAGACCATCC TGACCGGCGC CGACACCGCG GCGATCGTCG GCGACGGCAA GGTCGAGGGC
GTGGCGCTGA AGGACGGCAG CACCATCCCG GCCAGCCTGG TCGTCATGGC GGTCGGCATC
CGGCCGTCGA CCGCGCTGGC GCGCGCGGCG GGGCTGGCGG TCGGGCGCGG CATCCAGGTC
GACGACCATA TGGTGACCAG CGATCCCGCG ATCCTCGCGG TCGGCGAATG CGTCGAGCAT
GACGGACAGG TCTACGGCCT GGTCGCCCCG CTGTGGGAGA TGTGCCGCGC GCTGGCCGAC
GGGCTGGTCG CCGAGCCGAG CGGCTATCGC GGCTCGGTCA CCTCGACCAA GCTCAAGGTC
TCGGGCATCG ACGTCTTCTC GGCGGGCGAC TTCTCGGGCG GCGACGGGGC GGAGGACATC
GTCCTGCGCG ACGCCGCGCG CGGGATCTAC AAGCGGGTGG TGCTGCGCGA GGACAAGGTC
GTCGGCGCGG TGCTCTACGG CGATACCGCC GACGGAAGCT GGTATTTCGA CCTGCTGAGG
AAGGGCGACG ACGTCTCCTC CATCCGCGAC CTGATCATCT TCGGACAGGC CTTCGCCCAG
GGAGGGGGGC AGGCGGACCC TAAGGCGGCC GTTGCGGCGC TCTCGGACGA TGCCGAGATC
TGCGGCTGCA ACGGCGTCTC CAAGGGCAAG GTCGTCGCCT CGATCCAGGC CGGCGCGTGC
AGTCTCGACG CGGTGCGCGC GACCTGCAAG GCCTCGGCAA GCTGCGGCTC CTGCACCGGA
CTGGTCGAGA ATCTCCTCGC CCTCGCCCTG GGCGACGCGG TCGAGTCCGG GCCGAAGACG
ATCTGCAAGT GCAGCAGCTT CACCCATGAC GACGTCCGCC GCGAGATCGT CGCGCAGGAG
CTGCGATCGA TCCCCGAGGT GATGCAGAAG CTCCACTGGA CGACGCCCGA CGGCTGCTCC
TCCTGCCGCC CGGCGCTCAA CTATTATCTG CTCTGCGCCT GGCCCGGCGC CTATGTCGAC
GACCAGCAGA GCCGCTTCGT CAACGAACGC CTCCACGCCA ACATCCAGAA GGACGGCACC
TATTCGGTGG TGCCCCGCAT GTGGGGCGGC CTGACCAACC CGCGCGAGCT GCGCGCGATC
GCCGATGTCG TCGAGAAATA TGACGCGCCG ATGGTCAAGG TGACTGGCGG CCAGCGGCTC
GATATCTTCG GGATCAGGAA GGAGGACCTG CCCGCCGTCT GGGCCGACCT CAACGCCGCC
GGGATGGTCT CGGGCCATGC CTATGGCAAG GCGCTGCGCA CGGTGAAGAC CTGCGTCGGT
TCGGAATGGT GCCGCTTCGG CACGCAGGAT TCGACCGGCC TGGGCGTCAA GGCGGAGAAG
ATGAGCTGGG GCTCGTGGAT GCCCCACAAG TTCAAGATCG CGGTGTCAGG CTGCCCGCGC
AACTGCGCCG AGGCGACGAT CAAGGATTTC GGCGTGATCT GCGTCGACAG CGGCTATGAG
CTGCACGTCG GCGGCAATGG CGGCATCAAG CTGCGCGGCA CCGACCTGCT GTGCAAGGTC
GCGACCGAGC AGCAGGCGCT CGACCATATC GCCGCCTTCA TCCAGCTCTA CCGCGAGGAG
GCCTGGTATC TCGAGCGGAC CGCGCCGTGG ATCGAGCGGG TGGGCATCGA CCATGTCCGC
CGCCGCATCG TCGAGGACGC GGTCGGCCGC GAGGCGCTGA CCGCGCGCTT CCTCTTCTCG
CAGAGCTTCT CGCAGGACGA TCCCTGGGCC GCCCGCGCCG CCGGCAAGGA CCGCGAGCAG
CATGCCCATC TGGGCGAATT CCGCCCCCTC GAAATCCTGG CCGCGGAGGG AGCGCGATGA
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| Protein sequence | MDFQGTGIGA ENRDDAPDTV GTQRLVVIGN GMAGCRAVEE ILARDPGRFR ITIFGAEPHV
NYNRIMLSPV LAGEKSFDEI VINDAAWYAD NGIELVAGDP VAAIDRAART VTANSGRTVG
YDRLLIATGS DPFIIPVPGK DLPGVISFRD MKDVDAMLAA ADRGGDAVVI GGGLLGLEAA
HGLSLRGMKV TVLHLMPTLM ERQLDEAAGW LLKTELERRG QTILTGADTA AIVGDGKVEG
VALKDGSTIP ASLVVMAVGI RPSTALARAA GLAVGRGIQV DDHMVTSDPA ILAVGECVEH
DGQVYGLVAP LWEMCRALAD GLVAEPSGYR GSVTSTKLKV SGIDVFSAGD FSGGDGAEDI
VLRDAARGIY KRVVLREDKV VGAVLYGDTA DGSWYFDLLR KGDDVSSIRD LIIFGQAFAQ
GGGQADPKAA VAALSDDAEI CGCNGVSKGK VVASIQAGAC SLDAVRATCK ASASCGSCTG
LVENLLALAL GDAVESGPKT ICKCSSFTHD DVRREIVAQE LRSIPEVMQK LHWTTPDGCS
SCRPALNYYL LCAWPGAYVD DQQSRFVNER LHANIQKDGT YSVVPRMWGG LTNPRELRAI
ADVVEKYDAP MVKVTGGQRL DIFGIRKEDL PAVWADLNAA GMVSGHAYGK ALRTVKTCVG
SEWCRFGTQD STGLGVKAEK MSWGSWMPHK FKIAVSGCPR NCAEATIKDF GVICVDSGYE
LHVGGNGGIK LRGTDLLCKV ATEQQALDHI AAFIQLYREE AWYLERTAPW IERVGIDHVR
RRIVEDAVGR EALTARFLFS QSFSQDDPWA ARAAGKDREQ HAHLGEFRPL EILAAEGAR
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