Gene Swit_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1695 
Symbol 
ID5197459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1889657 
End bp1890811 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content65% 
IMG OID640581243 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001262196 
Protein GI148554614 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.498016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGA AGAAGATCGA CAAATACACC GCCCTGGTGA TGCAGCCCCA TGTCGAGGTC 
GCCGAGGACC GCGCGGGCAT CGCCAAGAAC CTCGACCGCG CGATCAACAT GATCGATTTC
GGGGTCGGCT ATTTCTGGGA GCTGCCGGCC AGGCTGGTCG TGTTCCCCGA ATATTTCATG
CAGGGCGTCA CCACGCCGGG CAAGGGCGAG CACGGCATCG ACAGCTTCAT GAAGAAGGCG
ATCGAGCTCG ACGGCCCGGA GATGCGGCGG CTGGGCGAGG TCGCGAAGGA ATATAATCTC
TACATCGCCG GCGGCGGCGT GGTCGAGCGG GTCAAGGAGT TCCCCGACCG CTGGTTCAAC
ACCGCCTTCA TCATCGGGCC GTCGGGCGAG GTGGTGCTGC GCTATCACAA GTGGCACATC
CCCGCCTCGA TCGGCCTCGG CACGTCGCCC CACGACATCT TCGACGAATA TAAGGAAGTG
TTCGGCGGCG ACATCTCGAC GCTCTTCCCG GTGATCGACA CCGAGATCGG CAAGCTCGGC
ACGATGACCT GCCATGACGG CTGCACGCCC GAGGTGTCGC GCGCGCTGGG CTATAACGGC
GTCGAGGTGA TCTGCCATCC GGTGGCGCTC CAGGAGGTCG AGGGCGTGTC GCAGCCCTGG
GACTTCTGGA TGTTCACCCG GCGCACCCGC GCGCACGACA ACATGGCCTA TGTGCTCGGC
TCCAACTGGG GCACGGTCGA CTATGCCTAT TATCCCAAGG CCTTCTGCCC CGGCGGTTCG
TTCGCGATCG ACTATACCGG CATGGTGCAG CGCCACGCGC CCTATCCGCA GGAGCAGGTG
CTCGGCGTGA CGATCGACAT CGAGTCGCTT CGCGAGCATC GGTCGCGCTG CAACCACAAT
ACCTGGGTCG ACGTCCGCAC CGAGGGTTTC CGGCAGATCT ACGAGAAGCC GATCTATCCG
GCGAACCAGT TCCCGTCGGG CAAGCCGCCG CGCACGCTGG CGGACAAGAT GGGGCCGGTG
CGCGAGGTCT TCTCCGATCT CTACGGCCGC GGCCAGTTCA CGCCGCCCGC CGGCAAGAGC
GTCGCCGACA TGGCGGACCT TCACGAGCAG CGCGTCCGTG CCGCCCAGGC GCGCGGCACC
CTGCGCAAGG GCTGA
 
Protein sequence
MTAKKIDKYT ALVMQPHVEV AEDRAGIAKN LDRAINMIDF GVGYFWELPA RLVVFPEYFM 
QGVTTPGKGE HGIDSFMKKA IELDGPEMRR LGEVAKEYNL YIAGGGVVER VKEFPDRWFN
TAFIIGPSGE VVLRYHKWHI PASIGLGTSP HDIFDEYKEV FGGDISTLFP VIDTEIGKLG
TMTCHDGCTP EVSRALGYNG VEVICHPVAL QEVEGVSQPW DFWMFTRRTR AHDNMAYVLG
SNWGTVDYAY YPKAFCPGGS FAIDYTGMVQ RHAPYPQEQV LGVTIDIESL REHRSRCNHN
TWVDVRTEGF RQIYEKPIYP ANQFPSGKPP RTLADKMGPV REVFSDLYGR GQFTPPAGKS
VADMADLHEQ RVRAAQARGT LRKG