Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1685 |
Symbol | |
ID | 5197439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1876578 |
End bp | 1877867 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640581233 |
Product | fumarylacetoacetase |
Protein accession | YP_001262186 |
Protein GI | 148554604 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.864443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTAT CGATGCGCTA TCCCGCGATC GACGAAACCC ACGATCCCGC GCTGTCGAGC TGGGTCGAGG GCGCCGACGA CCATCCGGAC TTTCCGGTCC AGAACCTGCC GCTCGGCATC GTCTCGACCG GCGGTGGCGA TCCGCGCGTC GGCGTCGCGA TCGGCGAGCA TGTCCTCGAC CTCGCCGCCA TCGCCGGCCT GCTGCCCGAC GACGGCCGCG CCGCGCTGTC GCAACCCTCG CTCAACGCCT ATATGGCACT GCGACCGGAG CAGCGGCTGG CGTTGCGGCG CCGGCTTTCG TCGCTGCTGA CCCGCGAGGA CGAGCGCCGG GCGATCGAGC CGCATCTCCA TCGCGCGTCC GCCTGCATGC TGCACATGCC GGCGCGGATC GGCGACTACA CCGATTTCTA CACCGGCATC CACCATGCGG TGAACCTCGG GAGCGTGTTC CGCCCCGACC ATCCGCTGCT GCCCAACTAC AAGCATGTCC CGATCGGCTA TCACGGGCGC GCCTCCTCGG TCCGGATATC GGGCGTCCCC GTCCGCCGCC CCTCCGGGCA GGTCAGGACC GCCGAGGGGA CGGCGCCCGA GCTGGCCCCC ACCCGGCGGC TCGACTTCGA GCTGGAGTTG GGCTTCTGGG TCGGCGCGGC CAACCGCCCC GGCGAAGCAC TGCCGATCGA GCGCGCGCCC GACAGCCTGG TCGGCATCTG CCTGCTCAAC GACTGGTCCG CGCGCGACGT CCAGGCCTGG GAATATCAGC CGCTCGGCCC CTTCCTCGCC AAGAATTTCC ACACGACCAT CTCCCCCTGG GTGGTGACGG CCGAGGCGCT GGCGCCGTTC CGCATTGCCC AGCCGGCGCG GCCCGAGGGC GACCCCGCTC CCCTGCCCTA TCTGTTCGAC GCGGCCGACC AGGCGCATGG CGCGCTGTCG CTCGACCTCC ATGTCGCCCT GCTGCCGCGC GGCGGCACGG AGGCCGTCCC GATCGCGCGC TCCCATGCGT CGCACATGTA TTGGACGCCG GCGCAGCTCG TCGCCCATCA CAGCGTCGGC GGCTGCAACC TCGAACCCGG CGACCTGCTG GGCAGCGGCA CGATCTCCGC CCCCGTTCCC TCGGGACTCG GCAGCCTGAT GGAGATGACG CGCGGGTGGA AGGACCCGAT CACGCTCCCC GACGGGCAGA GCCGCCTCGC CCTCGAAGAC GGCGACGAGA TCCGGTTGAG CGCGGTGGCG TCGGCTCCGG GATTCCGGTC GATCGGCCTG GGCCGCTGCG ACGGAAGGGT AGTCGCATGA
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Protein sequence | MTLSMRYPAI DETHDPALSS WVEGADDHPD FPVQNLPLGI VSTGGGDPRV GVAIGEHVLD LAAIAGLLPD DGRAALSQPS LNAYMALRPE QRLALRRRLS SLLTREDERR AIEPHLHRAS ACMLHMPARI GDYTDFYTGI HHAVNLGSVF RPDHPLLPNY KHVPIGYHGR ASSVRISGVP VRRPSGQVRT AEGTAPELAP TRRLDFELEL GFWVGAANRP GEALPIERAP DSLVGICLLN DWSARDVQAW EYQPLGPFLA KNFHTTISPW VVTAEALAPF RIAQPARPEG DPAPLPYLFD AADQAHGALS LDLHVALLPR GGTEAVPIAR SHASHMYWTP AQLVAHHSVG GCNLEPGDLL GSGTISAPVP SGLGSLMEMT RGWKDPITLP DGQSRLALED GDEIRLSAVA SAPGFRSIGL GRCDGRVVA
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