| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1681 |
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| Symbol | |
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| ID | 5196552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1872805 |
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| End bp | 1873782 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581229 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001262182 |
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| Protein GI | 148554600 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.819964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCT TTTTCCAACT GGGCACGTTC GCCCGCGACG ACGGCTCCCT CCCCGCGCTG
GTGATCGAGG GCGCGGTGCT CGACCTTCGC GCCGCCGCCG AGCGCGCGGG CCTGGCGCTG
CCCCCCTTCG CGGCGATCAG CGACCTGCTC GGCGACTGGG ACGCGACCTT CGAGCGCCTG
TCCGCCGTGG CCGATCACGC GCGGGCGGAC GGCCTCCAGG CCTTCTCGCT CGGCACGGTG
GAGAGTCTGC GCCCCTGCCC GCCGCCGGGC CGGGTCGGCA AGATGCTCTT CGCGGCCGCG
AACTACAGCG ATCATGTCCG CAACATGCGC AAGACCTTCA CCCCCGACAT CCCGCTCGCC
GACCAGGGCA AGCAGTTGCC GCCGCTGCGC CCCTATATGT TCGGCAAGAT CAACGTGCCG
ACCGGGGCCT TCGACGACAT CATCCTGCCG CCCGGCATGG AGCGGATCGA CTGGGAGGCC
GAGCTGATGG TCGTGATCGG CACGCCGGGC CTTGCGATCC GCCCGGCCGA GGCGCACCGC
CACATCGCCG GCTACATGAC CGGAAACGAC GTCTCCTGCC GCGACCGGAC CTGGCGCGAG
GATCGCCCGA CCATCCGGTC CGACTGGCTC GGCGGAAAGA GCTATGACAG CTTCGCGCCG
CTCGGCCCGC TGCTGACCCC GCGCCAGTTC GTGCCCGACC ATGCCGACCT GGCGATCCGC
CTGTGGGTGA ACGGCGAGCT CAAGCAGGAC GGCAATTCGC GCGACATGAC CTTCGGCATC
GAGGAGCAGA TCGAATATGC CTCGTCGATG ATGACGCTGC TGCCCGGCGA CGTGATCGCC
ACCGGCACCC CCGCCGGCAC CGGCCAGGAG CGGGGCGAAT TCCTCAAGGA AGGCGACATC
GTCGAGACCG AGGTGGAATC CTGCGGACGA CAGCGCAACC GCGTCGTCGC GCGCCGCCGG
GCGGAGATCG CGGCATGA
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| Protein sequence | MSSFFQLGTF ARDDGSLPAL VIEGAVLDLR AAAERAGLAL PPFAAISDLL GDWDATFERL
SAVADHARAD GLQAFSLGTV ESLRPCPPPG RVGKMLFAAA NYSDHVRNMR KTFTPDIPLA
DQGKQLPPLR PYMFGKINVP TGAFDDIILP PGMERIDWEA ELMVVIGTPG LAIRPAEAHR
HIAGYMTGND VSCRDRTWRE DRPTIRSDWL GGKSYDSFAP LGPLLTPRQF VPDHADLAIR
LWVNGELKQD GNSRDMTFGI EEQIEYASSM MTLLPGDVIA TGTPAGTGQE RGEFLKEGDI
VETEVESCGR QRNRVVARRR AEIAA
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