| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1676 |
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| Symbol | |
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| ID | 5200274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1866230 |
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| End bp | 1868509 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581224 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262177 |
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| Protein GI | 148554595 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCA GCAAATTCGT CCGCGGCGCA TCGCTGATCG CCATCGCCGG CGCTTTCGCG
GCGGTGCCGC CGGCCTATGC GCAAGGCCAG GCCGGGGTCG AGGCGCAATC GGGGCAGGAT
GGTTCGTCCG GCGGGCTGGA GGAGATCGTC GTCACCGCCC AGAAGCGTTC GGAAAACGCC
CAGAAGGTCG CCGCGACGGT CACCGTGGTC AATGCGGAGG CGCTCGTCGC CGGCGGCGTC
ACCGATCTTC GCGGCGTCGC CAGCTTCCTG CCGATGACCA ATCTCAGCCA GGAGAATGTG
GTCACGCAGG CCTTCATCCG CGGCATCGGC CAGACCAGCG ACGCGGAGAC CAACGATCCC
GCCGTCGCCA CCAATATCGA TGGCGTCTAC CAGTCGCGCT ATACCCTGTC GGGATCGATG
TTCGACATCG AGCGGGTCGA GGTCCTGGCC GGTCCGCAGG GCACGCTGTA TGGCCGCAAC
GCGGCCGGCG GCGCGATCAA CATCACCACC AAGCTGCCGC AGTTCACGCC CGGCGGCGAG
GCCCGGTTCG AGATCGGCAA CTATAACCGC TTCCACGGCT TTGGCGCGAT CAACGTCCCG
CTCTCGCAGC AGGTGGCGCT GCGCGGCGCC GTCGATTATC TGCGCCACGA CGGCTACCTC
TCCAACGGGC AGAACGCGAA GGACAATCTC GCCGCGCGCC TGACCGCGCT GATCGAGCCC
GACAGCGACC TGACGATCGT GCTGCGCGGC GAATATCAGC ATACCGGCGG CGACGGCGAC
GGCATCGTGC TGCGCCCGCT CCTCAAGAAG AGCGATCCCT GGTTCCAGCC CGAGATTCCC
GGCGAGGACT TCTACGTCCA TCGCAAGGTC TACAAGGGCA ATGCCGAGAT CAAATATCAG
GTCGGCGGAC CGGCCAATCT CTCGGTCACC TATATTCCGG CCTATACCTA TTACGACCTG
AGCTACCGGT CGCCGATCGG CTACAACCAG CGCTATTATC CGAACCCGGG CGTCGCCGGG
AACCCGTTGA CCGGCTTCGC CGGCGCGCTG GAGAATCTCG GCGATACCGG CCGGCAGCTC
ACCAACGAGC TGCGCCTGGC GGGCGATACC GGCCGGCTCA ACTTCGTCCT GGGCCTGTTC
CAGTTCCGCC AGTCCGCGCA CGGCCCGGGC GTTTCGTTCG AGATCTACAA TCCGGGGGTC
TTCTCGGGCG GCTCGTTCAG GCCGTACAGC TTCGCCTCGG GCGGCCCGCA GAACGATCTC
AACGTCGTCA CCAACTCGAA GGCGATCTTC GGGCAGGCGA CCTATGCGGT CACCGATGCC
CTGCGGTTCA CCGTCGGCGG CCGATATTCT TGGGACAAGC GGCATGCCGA CGGCGTGTCC
CAGGGGCTCG TCCCGATCGC GAACATCGCG CTGCCGCCGA TCGTCTACGA CCTGCGCCTG
TCGGATAACC GGTTCGACTG GAAGGTCGGC GTGGAGGCCG ACGTCGCGCC GCATTCGATG
GCCTACGCCA CCGTGCAGAC CGGCTATATC GGCAGTGGCT TCAACATCAC CTCGAACGCC
GCCGCCTCGA CCTTCAAGCC GGAGACGCTC ACCGCCTATA CCGTCGGCCT GAAGAATTCA
CTGTTCGGCA ACTCGCTGCG CCTCAACCTC GAGGCCTTCT ATTATGACTA CCGCCAGTTG
CAGGTGTCGG CCTACAACAG TGCGTCGGGT TCGGCGCTCC TCTACAATGT GCCGAAGTCG
GAGATTTACG GCCTTCAGGT CGACACGACC TGGAAGGCGG GGCCGAACAC GACGTTCACC
GCGAACCTCG GTTATCTCCA TGCCACGATC AAGCGGGGCG TGCTGCCACC GGGCGCCGTC
TATACCTGCG GGGTTCCGGG CGCCATTCCG GCCGAACTGT GCAACGGCAA CAGCCTGATC
GACTATTCGG GCTTCACCCT TCCCAATGCG CCGCGCTGGT CGGGGTCGAC CTCGGTCACG
CAGATCTTCC CGCTGGCGTC GGGCGCCGCG ATCGAAGCGC GCGGATCGAT GAACTTCGAA
TCCAAGTCCT GGGGCCTGTT CTCGCATCTG GAAGGGCTCG ACAAGCCGGC CTTCGCGAAG
ATCGACGCGT CGCTCACCTA CCGGTCGAGC GACGAGCGCT GGGCGCTCGG CCTGTGGGTT
CGCAACCTGA CCAACAACGC GCGCTACGTG ACCCCGACCA CGACCAACGT CTACGGGCTG
AACACCTGGT TCATCGATGC GCCGCGGACG GCAGGCATGA AGGCCGAGCT GTCCTTCTAG
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| Protein sequence | MGSSKFVRGA SLIAIAGAFA AVPPAYAQGQ AGVEAQSGQD GSSGGLEEIV VTAQKRSENA
QKVAATVTVV NAEALVAGGV TDLRGVASFL PMTNLSQENV VTQAFIRGIG QTSDAETNDP
AVATNIDGVY QSRYTLSGSM FDIERVEVLA GPQGTLYGRN AAGGAINITT KLPQFTPGGE
ARFEIGNYNR FHGFGAINVP LSQQVALRGA VDYLRHDGYL SNGQNAKDNL AARLTALIEP
DSDLTIVLRG EYQHTGGDGD GIVLRPLLKK SDPWFQPEIP GEDFYVHRKV YKGNAEIKYQ
VGGPANLSVT YIPAYTYYDL SYRSPIGYNQ RYYPNPGVAG NPLTGFAGAL ENLGDTGRQL
TNELRLAGDT GRLNFVLGLF QFRQSAHGPG VSFEIYNPGV FSGGSFRPYS FASGGPQNDL
NVVTNSKAIF GQATYAVTDA LRFTVGGRYS WDKRHADGVS QGLVPIANIA LPPIVYDLRL
SDNRFDWKVG VEADVAPHSM AYATVQTGYI GSGFNITSNA AASTFKPETL TAYTVGLKNS
LFGNSLRLNL EAFYYDYRQL QVSAYNSASG SALLYNVPKS EIYGLQVDTT WKAGPNTTFT
ANLGYLHATI KRGVLPPGAV YTCGVPGAIP AELCNGNSLI DYSGFTLPNA PRWSGSTSVT
QIFPLASGAA IEARGSMNFE SKSWGLFSHL EGLDKPAFAK IDASLTYRSS DERWALGLWV
RNLTNNARYV TPTTTNVYGL NTWFIDAPRT AGMKAELSF
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