| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1673 |
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| Symbol | |
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| ID | 5200271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1861792 |
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| End bp | 1864065 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581221 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262174 |
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| Protein GI | 148554592 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTTC GGAAGCGCGC CATCGGCGTC ACCATGGTGA TGATAGGCTG CCCTTCGGCG
CCGCTCATGG CGCAGGGCGC CGTCGACGGT GGCGGCGACA TCATCGTCAC CGCCACCAAG
CGATCCGACA CGCTGCAGAA CGTCCCGCTC AGCATCAGCG CGATCGGCGC GGCCTCGCTC
GAACAGCGAT CGGCGTCGAC CTTCATCGAC TATGCCGCGT CGATCCCCAA TCTCGGCTTC
GGCTATACCG GCGACGGCGC GTTCAGCGCG CGGACCATCT CGCTGCGCGG CATCTCCGGC
GACAACACCA CCGGCTTCTA CCTCGACGAA ACCCCGGTCA TCGACTCGAT CGATCCCAAG
ATCGTCGACG TCGACCGCGT CGAGGTGCTG CGCGGGCCGC AGGGAACCCT CTATGGCGCG
CGCTCGATGG GCGGCACGGT CCGCATGATC ACCAAGCAGC CCCAGCTCGG CGAGACCGCC
GGCCGCATCC ATGCGAGCCT CGGCACGACC CGGCACACCG ACCGGCCCAA CTATGCTGCG
GACGGCGCGA TCAACCTGCC GCTGGGCGAC AAGGCGGCGC TGCGGGCCTC GGCCTTCTAT
CAATATGACG CCGGCTTCTT CGAGCGCCAG TTCGCCCAGG GGAGCAACGG CGCGCCGGGG
CGACACGACA ATATCGGGCG GACCAAATCC TGGGGCGGCG CGCTTTCCGT GCGGCTGGAA
CCGACCGACC GGCTCTCGAT CACGCCCCGG CTGCTCTACC AGAAGAGCGT CGCCAACGGC
TTTCCCTATG CCGACGCCAC TCCGGCCGAC CTCAACCCGC GCGATCTGGT GCAGCGGCGC
CCCTTCGACA TCGCCGAAGG CGGATCGGAC CGCTGGTATC TCGCCAGCCT CGACGCCCAT
TACGACCTGG GGAGCGCCAG CCTGATCTCG TCGACCTCCT ATTTCAACCG CCGCGTCTAT
GAGACCGAGG ACCAGACCGG CGTCATCTCG GCCTTCTTCC TCGACCCGTT CGGCGCAGCC
CCCCTGCCCG CCGCGATCGA CCAGGGCGTC CCCTTCAAGC GCTTCGTCCA GGAGATCCGG
CTGGTGTCGT CGGACGAGGG CGCGTTGAGC TACGTGCTGG GCGGCTATTA TTCCTGGACG
CGGGACGGCG AATATTATCC GCCGGTGCCG ACGGCCGGTC TCGATGCCGC CACCGGCGGC
GCGCTCGGGT CGGACCTGTT CTTCAGCGAC GCCTATCGCA ACACCGTCAG GGAACCCGCC
GTCTTCGGCG AGGCGACCTA CAAACTGGGC CATGGCCTGA GCGCCACCGC CGGCCTGCGC
TGGTATCGGA TCACGACGAC GAACCTCGGC TTCCAGGACG GACTCGCCGC CGGCGGCCGG
ATCGAGGATC TCGCCGATGC CGCGACGGGC GGCGTCTTCC CGACCGGCAG GCCCTTCCGG
CTGCGCCAGT CGGGGGTCAA TCCCAAGGCG CAACTGAGCT GGAAACTCAC CCCGGACGAC
ATGATCTACG CGACCGCGGC GCGCGGCTTT CGCCCCGGCG GCGTGAGCCC GGCGGTGCCC
CCCTCCCCCG CCCTCGGCTG CGCCGCCGAC CTCGCGGCGC TCGGCACCTC GCTCAGCGCC
GCCAAATTCT ACAAGGCGGA CAGCCTGTGG AGCTATGAGC TCGGCGCGAA GACGAGCTGG
TTCGGCCGCA AACTGGTCGT CAACGGCGCG GCCTTCTACA TCGACTGGAA GAACATCCAG
CAGCAGATCC TGCCCCCCTG CGGCTATCAG TTCCGCGCCA ATGCCGGCGC GGCGCGAAGC
AAGGGCTTCG AGATCGAGCT CCAGGCGCGG CCGCTGCCCG GTCTCGAACT CGATGCCGCG
CTGGGCTATA TCGACGCGCG CATCAGCAAG GCGGGCAGCA TCTCGGCGCT CCGCAAGGGC
GATCGCGTGC TGCAGGTCCC CGACTGGACC TCGTCGGTCT CGCTGACCTA CACGACCGCG
ATCGGCGACG ACGCCCATCT GTCGACGCGG ATCGGCTACA GCTATGTCGG CGAGAGCTTC
AGCGCGAACA ACGATCCGTT CAATCCGCGC CGTCGGGCAC CCTATGAGCT GTGGGACGCG
CGCCTCGCCG TCACCTGGTC CCGCTACGAA CTCGCGCTGT TCGGCAAGAA CCTCGGCGAC
CGGCGCGCCA ATCTGGCGGA CAACCGGTCG ATCTCGGTCG AGACGCCGGG GCGGGCGCGC
GTCGTCGTGA ACCAGCCGCG CACCATCGGC ATCGAAATGC GGTCGAGCTT CTGA
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| Protein sequence | MGFRKRAIGV TMVMIGCPSA PLMAQGAVDG GGDIIVTATK RSDTLQNVPL SISAIGAASL
EQRSASTFID YAASIPNLGF GYTGDGAFSA RTISLRGISG DNTTGFYLDE TPVIDSIDPK
IVDVDRVEVL RGPQGTLYGA RSMGGTVRMI TKQPQLGETA GRIHASLGTT RHTDRPNYAA
DGAINLPLGD KAALRASAFY QYDAGFFERQ FAQGSNGAPG RHDNIGRTKS WGGALSVRLE
PTDRLSITPR LLYQKSVANG FPYADATPAD LNPRDLVQRR PFDIAEGGSD RWYLASLDAH
YDLGSASLIS STSYFNRRVY ETEDQTGVIS AFFLDPFGAA PLPAAIDQGV PFKRFVQEIR
LVSSDEGALS YVLGGYYSWT RDGEYYPPVP TAGLDAATGG ALGSDLFFSD AYRNTVREPA
VFGEATYKLG HGLSATAGLR WYRITTTNLG FQDGLAAGGR IEDLADAATG GVFPTGRPFR
LRQSGVNPKA QLSWKLTPDD MIYATAARGF RPGGVSPAVP PSPALGCAAD LAALGTSLSA
AKFYKADSLW SYELGAKTSW FGRKLVVNGA AFYIDWKNIQ QQILPPCGYQ FRANAGAARS
KGFEIELQAR PLPGLELDAA LGYIDARISK AGSISALRKG DRVLQVPDWT SSVSLTYTTA
IGDDAHLSTR IGYSYVGESF SANNDPFNPR RRAPYELWDA RLAVTWSRYE LALFGKNLGD
RRANLADNRS ISVETPGRAR VVVNQPRTIG IEMRSSF
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