| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1672 |
|---|
| Symbol | |
|---|
| ID | 5200379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1859560 |
|---|
| End bp | 1861713 |
|---|
| Gene Length | 2154 bp |
|---|
| Protein Length | 717 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640581220 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262173 |
|---|
| Protein GI | 148554591 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCA TCGGCTATGC CGACCGCTGG GAAGCACTGC CGGGCGAGGA GCTGGGCTTC
AAGGTCAGCG CCACGGCGGA CTATGCGGCG CGCATCGTCC GCCTGCGTCA TGGCGACACC
AATCCGCGCG GGCCGGGTTT CCGCGCGGAA ACGGTGGCGG ACATCGCCGA CCGCCTGCCG
GCGGGGGTGC AGGGCATCGA CCTCGGCTCC TATCTGCGCT GGGACCCCGA CGCCGATTTC
GACGATGGGG CGATGATGGC GGGCCTGAGC CTCTGGGCCA CGCTGCCGGG ACCGGACGAG
CAGGGACTGC TCTGCCGGTC CGACGGCCGG GGCCAGGGCT ATGGGCTGTA TCTCGGCGCG
GACGGCGCGG TCATCTGGCG CAGCGGCGCC GCCGAACTGC GCAGCGAGCC GATCCAACCG
CACCGCTGGC ACCGGGTGGC GATCAGCCGC GATCGGGACG GACGGATCGA GCTGATCGTC
GTCCCGCAGG CCTTCGTCCC GGGCCGGCAG GAACACCGCT TCGTGCAGCA GGGGCAGCCC
GCCGCCGCGA CGGGGCCCCT GCTGGTCGGC GCGGCGCGGG AGGCATCCCT CTATCGCCCG
CGCGGCGGGT TCAACGGCAA GATCGGCGAC ATCGCGATCG TGGCGGGCCG CGTCGACCCG
GCCACCATGG CGAAGCTGGC GGCGGGGACT TCGCCCGACG CGCCGGCGAT CCGATGGCAT
CTGGGGATCG AGGTCGACGG CCGGCGCGCG GTCGACCTGT CGGGCTTCGA TCGACATGGC
GAGGTGGTCA ATCGGCCGAC GCGCGGCGTC ACCGGCGCCC GCTGGAAGGC CAACGCCGAT
CGCTATGTCG ATGCGCCGGA CGAATATGAC GCCATCCACT TCCATGCCGA CGATCTCGAG
GATTGCCGTT GGGAGACGAG CTTCCGCTAT CGGATTCCCG AGGACCTGAA ACCGGGCGTC
TATGCCGCCG AACTCCGTTC CGGCGACGAA CGGCGCCATG TCGGCTTCCT CGTGACCGCC
AGGCCCGGCC GCGCGACCGC GCCCGTCGCG CTGCTGATCC CGACGGTCAG CTATCTCGCC
TATTCGAACG AGGCGCTGGA GCCGGAGCTG CTCGGCGCGT TGACGCCGCT GCGCAACCGC
CACCTCCAGG CGGAAGACTA TGCCTATCTG GCCGAGCATC GCCTGCTGAG CCTCTACGAC
CGGCATGACG ATGGATCGGG CCGCTGCATG TCGACCATCC GTCGGCCCAA CCTCACCTCG
ATGAACCCGC TGCATCGCTG CCGGCTCTAC GACGCGCCGC ACCAGCTCGC GGCCGACCTC
CATCTGGTCG ACTGGCTGGA GGAGATGGGC ATCGCCTATG ACGTGGTGAC CGACCATCAG
CTTCATAAGG AGGGCGCGGC GCTGCTGCGC TCCTACAAGA CGGTGCTGAC CGGCACCCAT
GCGGAATATT GGACCGCCCC GATGCTCGAC GGCCTCGAAG CCTATCGCGA CGGCGGCGGC
CGCGTGGTCT ATCTTTCGGG CAACGGCCTC TACTGGGTCG CGGCGCTCGA CGAGACCGGC
GACATCATCG AGATCCGGCG CCGCGGCGGC AGCGAAAGCT GGAAGGCGGC GGGCGGGGAG
GCGATCATCA GCCTCACCGG CGAGCATGGC GGCCTGTGGA AGGATCGCGG CCGCCCGCCG
CAACGCTATG TCGGCGTCGG CATGGCGTCG CAGGGCTTCG ATCGCGGCGC GCCCTATCGG
CGGACCCCCG CCAGCCATGA TCCCCGCGCC GCCTTCATCT TCGAAGGGGT CGACGACGAA
CTGCTCGGGG ACTTCCCGGC GTTGACGCTC GGCTATGGCG CGGCGGGCTA TGAGGTGGAC
AGGGTCGACG AACGCCTGGG CACCCCGGCC CACGCCCTCG TCCTCGCATC GTCGACCGGC
TTCAGCGACA GCTACCAATA TGTCCGGGAG GAGACCTTCT TCACCACCCC GTTCGACGGC
GGCACCGTCA ACGACGAGGT GCGCTCCGAC ATGGTCTATT TCGAATGTCC CGAAGGCGGC
GCCGTCTTTT CGGTCGGCTC GATCAGCTTC TGCTCCTGCC TGTCGTTCAA CGGCTATCAG
AACAATATCT CGAGAATTCT CAGGAATGTG GTGACGCATT TCAGCCGCGC CTGA
|
|---|
| Protein sequence | MTLIGYADRW EALPGEELGF KVSATADYAA RIVRLRHGDT NPRGPGFRAE TVADIADRLP
AGVQGIDLGS YLRWDPDADF DDGAMMAGLS LWATLPGPDE QGLLCRSDGR GQGYGLYLGA
DGAVIWRSGA AELRSEPIQP HRWHRVAISR DRDGRIELIV VPQAFVPGRQ EHRFVQQGQP
AAATGPLLVG AAREASLYRP RGGFNGKIGD IAIVAGRVDP ATMAKLAAGT SPDAPAIRWH
LGIEVDGRRA VDLSGFDRHG EVVNRPTRGV TGARWKANAD RYVDAPDEYD AIHFHADDLE
DCRWETSFRY RIPEDLKPGV YAAELRSGDE RRHVGFLVTA RPGRATAPVA LLIPTVSYLA
YSNEALEPEL LGALTPLRNR HLQAEDYAYL AEHRLLSLYD RHDDGSGRCM STIRRPNLTS
MNPLHRCRLY DAPHQLAADL HLVDWLEEMG IAYDVVTDHQ LHKEGAALLR SYKTVLTGTH
AEYWTAPMLD GLEAYRDGGG RVVYLSGNGL YWVAALDETG DIIEIRRRGG SESWKAAGGE
AIISLTGEHG GLWKDRGRPP QRYVGVGMAS QGFDRGAPYR RTPASHDPRA AFIFEGVDDE
LLGDFPALTL GYGAAGYEVD RVDERLGTPA HALVLASSTG FSDSYQYVRE ETFFTTPFDG
GTVNDEVRSD MVYFECPEGG AVFSVGSISF CSCLSFNGYQ NNISRILRNV VTHFSRA
|
|---|
| |