| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1660 |
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| Symbol | |
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| ID | 5200382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1846690 |
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| End bp | 1848396 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581208 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001262161 |
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| Protein GI | 148554579 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.06554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC GAAAATTTCG ATCCGAGATC ATCCGCGAAG GCGTGGTCCG AACGACCACG
CGCAGCTTCC TCTACGCCCT GGGCGAGGAC GACGAGGATC TGCGGCAGCC TCATGTCGCC
GTCATCCACA CCGGCGGCGA GATGAGCCCG TGCAACACCA CGCTGCGCGA TCAGGCGCTC
CACGCCAAGA CGGGCATCTA TGCGGGTGGC GGCACGGCGC ATGAATGCCC GGTGGTGTCG
GTGTCGGACG GGCTGTCGGT GGCGCATTCG GGGATGCGCT TCTCGCTGAT CTCGCGCGAG
CTGATCGCCG ACAGCGTGGA GGCGACCGTC CGGAGCCATC AATGGGATGG CGTCCTCGCG
GTCGGCGGCT GCGACAAGAA CATGCCCGGC CTGATGATGG GCATCGTGCG CTGCAACGTC
CCCTCGGTCT TCCTCTATGG TGGGGCAGCC CTGCCCGGCC ATCTCGGCGG CCGCGACGTC
AACATCGTCG ACACCTATGA GATGATCGGC CGGGTCCTGG CGGGAGAGGC GACGCAAGGG
GAACTGGAGG ACATGGCCCG CGCCTGTCTT CCGACGGCGG GAGCCTGTGC CGGCCAATAT
ACCGCCAACA CCATGGGCAT GGTGTCGGAA GCGCTCGGCC TGGCGCTGCT GGGCTCCTCG
ATGATCCCGG CGGTCTATGC CGCCCGGGCG CCGATGGCGC GCAAGGCGGG CAAGGTGCTG
ATGCGAGCGG TGCTCGGCGG TGGGCCGCTG CCGCGCGACA TCGTCACCCG CAAGGCGCTG
GAAAATGCCT GCGCCGTGGT CGCCGCCACC GGCGGTTCGA CCAACGCGCC GCTGCACCTT
CCCGCGATCG CCAACGAAGC GGGGATCGAT TTCGACCTCG ACGATGTCGC CGCAGTGCTC
GCCCGCACGC CGCTGATCGC CGATCTCAAG CCCGGCGGCC GCTTCCTGGC CAAGGACGTG
TTCGAGATCG GCGGCACCCC GGTGATCCTG AAGGCCCTGC TCGACGGCGG CCATCTCCAT
GGCGACTGCA TGACGGTCAC CGGGCGGACG CTCGCCGAAG ACCTCGCCAA GGTCTGCCCG
CCGGACGGGG CGGTGGTCCG CGACTGCGGC ATGCCGATCG CGCCGTCCGG CGGCGTGACC
GTGCTCAAGG GCAATCTGGC CCCAGACGGC GCACTGCTGA AGACCGCCGG CCTGAAGAAG
CTCGAGCATC GCGGCCCCGC CCGCGTCTTC GAGTCCGAGG AGCAATGCCT CTCCGCCGTG
CGGGCGATGG CCTATGCGGC CGGCGACGTC ATCGTGATCC GCAACGAAGG GCCGCGCGGC
GGCCCCGGTA TGCGCGAGAT GCTGGGCATC ACCGCGCTGC TCTACGGCCA GGGCATGGGG
GAGAAAGTCG CCCTGATCAC GGACGGCCGC TTCTCGGGCG CGACCCGGGG CATGTGCATC
GGCTATATCT CGCCCGAAGC GGCCAGTGAT GGACCGATCG GCCTGGTCCG CGACGGTGAT
CTCATCGCCA TCGACGCGCG CGACGGCATC GTCAGTTTGC AGGTCGAACT GCCAAAAGGT
GAGTTGGAGG CGCGTCGCGC CCTGCCCCGC CCCGCCCGTG TTCGTCCGAA AGGAGGGGTC
CTCGAAAAAT ATGCGGCGAT CGTTGGACCG GCCAACAAGG GCGCCGTAAC CCATAGCGGC
AACGTCATAT GGGAGATGGA TCCGTGA
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| Protein sequence | MTTRKFRSEI IREGVVRTTT RSFLYALGED DEDLRQPHVA VIHTGGEMSP CNTTLRDQAL
HAKTGIYAGG GTAHECPVVS VSDGLSVAHS GMRFSLISRE LIADSVEATV RSHQWDGVLA
VGGCDKNMPG LMMGIVRCNV PSVFLYGGAA LPGHLGGRDV NIVDTYEMIG RVLAGEATQG
ELEDMARACL PTAGACAGQY TANTMGMVSE ALGLALLGSS MIPAVYAARA PMARKAGKVL
MRAVLGGGPL PRDIVTRKAL ENACAVVAAT GGSTNAPLHL PAIANEAGID FDLDDVAAVL
ARTPLIADLK PGGRFLAKDV FEIGGTPVIL KALLDGGHLH GDCMTVTGRT LAEDLAKVCP
PDGAVVRDCG MPIAPSGGVT VLKGNLAPDG ALLKTAGLKK LEHRGPARVF ESEEQCLSAV
RAMAYAAGDV IVIRNEGPRG GPGMREMLGI TALLYGQGMG EKVALITDGR FSGATRGMCI
GYISPEAASD GPIGLVRDGD LIAIDARDGI VSLQVELPKG ELEARRALPR PARVRPKGGV
LEKYAAIVGP ANKGAVTHSG NVIWEMDP
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