| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1656 |
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| Symbol | |
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| ID | 5199408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1841254 |
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| End bp | 1843548 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581204 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262157 |
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| Protein GI | 148554575 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000345148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00188078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGTCCA AACGTTATCT GGTTGGCTCG TCCATGCTCA GCGTCGCGAC GTTGCTCTCC
GTTCAGCCGG CACTGGCCCA GACGACCGCC CCGGCGGACT CTGGTCTTAA CGAGATCGTG
GTGACCGCGC AGAAGCGCGA GGAGAACATC AACAAGGTCC CGATGTCGAT CACCGCCGCC
ACCGGCGAGC AGCTTCGCAG CGTCGGCGTC GCGCAGGTCC GCGACCTGGT GAAGATCACT
CCCGGCCTCA CCTATGCGGA CTCGGGCGTC GGCACGCCGG TCTATACGGT GCGCGGCATC
GGTTTCAGCG ACATCGCGCT GGCGGGTCGC CCCACGGTGA CGGTCTATGC CGATCAGGCG
CCCCTGCCGT TCAGCAGCGA AGCGCGCGGC GCCGCCCTCG ACCTCGAGCG GGTCGAAATC
CTGAAAGGGC CGCAGGGCAC CCTGTTCGGC ACCAATTCCA CCGGCGGCGC GATCAACTTC
GTCGCGGCGA AGCCGACCAA CGACCTGCAG GCCGGCGCGG ACTTCAGCTA TGGCCGCTTC
AATTCGCACC AGATCGGTGG CTTCGTGAGC GGGCCGATCA GCTCCACGCT CAGCGCGCGC
CTGGCGGTCC AGCATGACGG CATGGATGCC TGGCAGAAGA GCTACACCAC CGATCGCAAG
CTTGGCGTCC AGGATTTCTG GAACGGCCGC CTGACGCTCG ACTGGGCGCC CAGCGACAGG
TTGAAGACCA GCTTCACGCT GAACCGCTGG ATCGACCATT CGGATACCCA GGCGCAGCAG
TTCATCGCCT ACCGGCCGAC CACGCCGGCG CCGGTGCCGG AACTGACCGG CTATCCCGTC
GCGCCCCACA ATGCGCGCGC CGCCGACTTC GATACCGACA AGAGCTATCG CCGGGACAAC
GACTTCATTC AGGCGAACTT TCGCGTCGAC TATGATGTCG CCGACGCACT GACGCTTACC
TCGCTGACCT CCTACAGCCG CTACCGTGAA AATCAGCTCG CCGACCTCGA CGGCACCACG
GTGAACAACA GCTATTTCCA GACTATCGGC AGGCTTCGCT CGATTTCCCA GGAACTCCGC
CTCTCCGGAT CGATCGCGGA TCGCGGACAT TTCACGATCG GCGCCAATTA CGCCGACGAC
GACACCAGCG AGGTCAATCC GACCTTCAGC CCGGTCTCCT CCGTTTCGAA CCTGTTCTCC
GGCCTGTTCG GGACGCCGCT GCCGGTGACC TTCACCACCG ATACGAACCA GGATTCGGTC
ACCAAGGCGG TCTTCGCCAA TTTCGACTAC GACCTGACCG ATGCGATCAA CGTCTATGCC
GGCGGGCGCT ACACCGATTT CCGTACCAAG TTCACCGGCT GCGCGGGCGA CAGCGGCGAC
GGTGTCGCGG CCACGATCTT CAGCGTCCTC AACGGTTCCC CCGTCCTGCC GGGCCAGTGT
TTCACGGTCA CCGAGGCCGG GACGGCGGGC GTGGTCCGGT CGACCCTGAA GCAGGACAAT
TTCTCCTGGC GCGCCGGTGT CCAGTGGACC CTGGCCCCGC GCGTCCTGGT CTACGCCAAT
GTCAGCAAGG GCTATAAGGC CGGCAGCTTC CCGATCGTTC CGGCGAACAG CTATCTCTCG
TTCAATCCGG TCACGCAGGA ATCGGTGCTG GCCTATGAGG CCGGCTTCAA GGCCGGCCTG
TTCAACCGCG CCCTGCAACT CAACGGTGCC CTCTTCCATT ATGACTACAA GAACAAGCAG
GTGCTGGGCA GCGTCGTGCT GCCGGGCGTC GGCAACGTCC TGCGGCTGCT GAACATCCCC
AAGTCGCGCG TCAACGGCGC GGAGCTGGAG ATCACCGCGG CTCCGGTGAC GGGGCTCAAG
GTCTCGGCGG CGGGCACTTA TATCAGTTCG AAGGTGACCA GCTCCTTCGT GAACGTCGAT
CCGTTCGGCA CGCCTGGCGA CTTCAAGGGG CAAGCCTTCC CCAACACGCC GAAATGGCAG
TTCACCGGCG ACAGCGAATA TAAGTGGCCG GTGAGCGAGC GGCTCAACGC CTTCCTCGGC
GGCAATGTCA GCTATCAGAG CGAGACGTAC AGCCAGTTTG GCGAACTGGC CCTGTTCAAG
ACCAAGGCCT ATGCGCGGCT CGACCTGCGC GCCGGCATCG AGGCCGAGGA CGGGAAATGG
CGCGCCTCGA TCTGGGGGCG CAATGTAACC AACACCTATT ACTACTCGGC TGCCACTTAT
GTGCAGGATG CCGTCGTTCG CTACATGGGG CAGCCGGTGA CATACGGAGT AACGCTGGCG
TTTCGATATC GGTGA
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| Protein sequence | MKSKRYLVGS SMLSVATLLS VQPALAQTTA PADSGLNEIV VTAQKREENI NKVPMSITAA
TGEQLRSVGV AQVRDLVKIT PGLTYADSGV GTPVYTVRGI GFSDIALAGR PTVTVYADQA
PLPFSSEARG AALDLERVEI LKGPQGTLFG TNSTGGAINF VAAKPTNDLQ AGADFSYGRF
NSHQIGGFVS GPISSTLSAR LAVQHDGMDA WQKSYTTDRK LGVQDFWNGR LTLDWAPSDR
LKTSFTLNRW IDHSDTQAQQ FIAYRPTTPA PVPELTGYPV APHNARAADF DTDKSYRRDN
DFIQANFRVD YDVADALTLT SLTSYSRYRE NQLADLDGTT VNNSYFQTIG RLRSISQELR
LSGSIADRGH FTIGANYADD DTSEVNPTFS PVSSVSNLFS GLFGTPLPVT FTTDTNQDSV
TKAVFANFDY DLTDAINVYA GGRYTDFRTK FTGCAGDSGD GVAATIFSVL NGSPVLPGQC
FTVTEAGTAG VVRSTLKQDN FSWRAGVQWT LAPRVLVYAN VSKGYKAGSF PIVPANSYLS
FNPVTQESVL AYEAGFKAGL FNRALQLNGA LFHYDYKNKQ VLGSVVLPGV GNVLRLLNIP
KSRVNGAELE ITAAPVTGLK VSAAGTYISS KVTSSFVNVD PFGTPGDFKG QAFPNTPKWQ
FTGDSEYKWP VSERLNAFLG GNVSYQSETY SQFGELALFK TKAYARLDLR AGIEAEDGKW
RASIWGRNVT NTYYYSAATY VQDAVVRYMG QPVTYGVTLA FRYR
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