| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1652 |
|---|
| Symbol | |
|---|
| ID | 5198325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1837745 |
|---|
| End bp | 1838458 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640581200 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262153 |
|---|
| Protein GI | 148554571 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.887044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0204387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCGG CGAACATTAC CCTCTACGAG ATTGCCGTAT CGGGTGGCGC GTCGGCCAGT
CCGTTCGTAT GGCGGATCAA ATTCTCGCTT GCCCGCAAGG GTATCCCGTA TCGATCGAAG
ATGCTCGGCC TGACCGACAT TTCCCGGCAA TTCGACGGGC GCTTCCAAAC CGTTCCCATC
ATCGACTTCG GCGACAGGCA GATGAACGAG AGCATCGCCA TCGCGGATTG GCTCGACGAG
GCTTATCCCG ATCTGCCGGC GATCTTCTCT GGACCGGCCG AGCGGGCGAT GATCGGCTTC
TTCGACCAGT GGCTCCTGCA ACTGATCGTG ACGGGGATCC TGCCGATCTA CGCGCTCGAC
GCCCATGACG GTGCGGCACC CCATGATCGG GACTATTACC GGCGATCCAG GGAGTCGTTC
TTCGGCCAGA CGCTCGAGGA GGTCGTGGTG AAGCGCGAGG AGCGGTTGCC GGATGTCCGT
CGCTCGTTCG AGCCCGTCCG GCAGACGATC GTGAACCAGC CGTTCCTCGG TGGGACGAGC
CCCAATTTCG CGGATATGTG CCTGCTGGGC CTGTTCATTT TCGTGGGTAC GATCGGGACC
CTGCCGCTTC TCGCGGCCGA CGATCCGCTC GTCGCCTATG CGGATCGCGG ATTCGCCTGC
TTCCCGTCGG AGACGGCCTC GCTCAGGCTG AAGCTCGGTG AGCCGACGCG CTAG
|
|---|
| Protein sequence | MMAANITLYE IAVSGGASAS PFVWRIKFSL ARKGIPYRSK MLGLTDISRQ FDGRFQTVPI
IDFGDRQMNE SIAIADWLDE AYPDLPAIFS GPAERAMIGF FDQWLLQLIV TGILPIYALD
AHDGAAPHDR DYYRRSRESF FGQTLEEVVV KREERLPDVR RSFEPVRQTI VNQPFLGGTS
PNFADMCLLG LFIFVGTIGT LPLLAADDPL VAYADRGFAC FPSETASLRL KLGEPTR
|
|---|
| |