| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1650 |
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| Symbol | |
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| ID | 5198323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1835348 |
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| End bp | 1836208 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581198 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001262151 |
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| Protein GI | 148554569 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0427187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGG TTCGATATGA TGCGGGGGCG GGCGCGCGCA TCGGCGTGGT GAAGGCGGAT
GGGATCGTCG ACCTGACCGC GGCCCGCCTG GGCTGGACGA CGATGATGGA GATCATCTCG
GCCGGCGCCG AGACGCTGGA CGCGATCGCC GGCATCGTGG CGCGTGACGA TGCGTCGGTC
GCGCTCGACG GTGTGCGACT GCTGGCCCCC ATCGAGCGGC CCGGCAAATA TCTCGCGATC
GGCATGAACT ATGCCAAGCA TCGCGACGAA GCCGACAAGC TGGGAATCGC GAGCCCGCAG
CATCAGCTCT GGTTCAACAA GCAGACGAGT TGCCTGTCGG GTCCGTTCGA TGCGATCGAC
CCCGGCGTCT CCGAGAAGCT GGATTATGAA GTGGAGCTGG CCGCCGTCAT CGGCCGGGCC
GCCAAGCGGG TGTCGGAGGC CGACGCGCCG GGCCATGTGT TCGGCTATAT GGTGGCGAAC
GACGTGTCCG CCCGCGACTG GCAATTCCAT TCGCAGACCT TCACCATGGG CAAGTCGTTC
GACACCCATG GGCCGATCGG TCCCTGGATC GTCACGGCGG ACGAAATCGC GGATCCGCAT
GCTCTGGGGC TGCGCTGCTT CGTGAACGGC GAGAAGCGGC AGGACAGCAA TACCAGCGAG
ATGGTGGCCA GCCTGTGGGA CCAGATCGCC TATTTGTCGA CCGCGTTCAC GCTGGAGCCC
GGCGACCTGA TCGCGACCGG AACGCCGCAT GGCGTCGGCG CTGCGCTGGA GCCGCCGATC
TTCCTCAAGC CCGGCGATGT CGTGCGCTGC GAGATCGACG GGATCGGCGC GATCGAGAAT
ATGGTCGTCG CGCCGCGCTG A
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| Protein sequence | MKLVRYDAGA GARIGVVKAD GIVDLTAARL GWTTMMEIIS AGAETLDAIA GIVARDDASV
ALDGVRLLAP IERPGKYLAI GMNYAKHRDE ADKLGIASPQ HQLWFNKQTS CLSGPFDAID
PGVSEKLDYE VELAAVIGRA AKRVSEADAP GHVFGYMVAN DVSARDWQFH SQTFTMGKSF
DTHGPIGPWI VTADEIADPH ALGLRCFVNG EKRQDSNTSE MVASLWDQIA YLSTAFTLEP
GDLIATGTPH GVGAALEPPI FLKPGDVVRC EIDGIGAIEN MVVAPR
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