| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1649 |
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| Symbol | |
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| ID | 5198322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1833875 |
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| End bp | 1835284 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581197 |
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| Product | amidase |
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| Protein accession | YP_001262150 |
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| Protein GI | 148554568 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.045909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC TTTGGCGGCT TTCGGCAAGC GAGATGGTCC GGCAGATGGC TGCGGGAGAA
GTGACGTCGC GCGAGCTTGT CGAAGCCCAC CTCGCCCGGA TCGACGCGGT CAATCCGCGG
GTCAACGCGG TGGTCCGCGT CCTGCGCGAC GAAGCGCTGA AGGCCGCCGG TGACGCCGAT
CGCAAGCGGT GGGAAGGCGC GCGCCTCGGC TCGCTGCATG GCGTCCCCTT CACGATCAAG
GACTGTATCG ATGTCGCCGG CCTGCCGACG ACCTGGGGCT CCGCTGTGCT GGCCGAAGCG
ATATCCCCGG TCGACGCGCC TGTGGTGGAG AAGATGCGCG CGGCTGGCGC CATTCCGATC
GGGCGCACCA ACCTTCCCGA CTTCGCCATG CGGCCATCGA CCGACAGTTC GCTCTACGGC
CTGACGCGCA ATCCCTGGGA TCATGACCGG ACGGCGGGCG GATCGAGCGG TGGCGACGCG
GCGGCGCTGG CATCCGGCAT GACGCCGATC GGACTGGGAT CGGACCTGGG CGGCTCGCTG
CGCAATCCCG CCAATGCCTG CGGCATCGTC AGCGTCCGGC CGTCCGCCGG GCGCGTGCCC
ATCGCGCAGC AGGTTCCGGG TCCGGACCAG CACATCTCCA ACCAGTTGAT GAACGTCCAG
GGCCCGATGG CGCGCACCGT CGCCGATGTC CGCCTCGTCC TCGAAACGAT CATCGGCGCC
CATCCCAAGG ACCCATGGGC CATCGATGCG CCCCTGGTCG GCAAGCCGAT CCCGTCGCCG
ATCCGCGTGG CGGTCCTGAC CACCCTGCCC GGCGCGCCGC TGGAAAGCGC CGTGGCGGAC
GCCGTGCGCG GCGCGGCCGA CGCGCTGGCC AATGCCGGCT ATGACGTCGT CGAGGCCTGT
CCGCCGCGCT ATGAGGAAGC GATAGAGACC TGGGGACAGA TCATCGTCGG CGACCAGCGC
TTCGGCGCCG AAGGGGTGCT GCCGCTGCTC AGTCCCGATA CGCTGCGCTA TTTCAACTTC
TACCTGGACG GCGTTCCGCC CTTCGCCAGT TCCTTCGAGA TGTCGGAGGC CCTCATCCGC
CGCCACGCCA TCGCAATGGA ATGGTCGGCA TTCCAGGAAG ACCATCCCAT CATCCTGGGT
CCGACCTGGA CCCGCGTGAC ACCAGGTCAT GGCTATGATC TGGAGGCAGG GAGCCTGGCG
GGCCTGCTGG AGACCATCCG GCCGGTGACG CCCGCCAATC TGCTCGGCCT GCCGTCGGTC
TGCGTGCCGA GCCGGCTCGA TCCGGCGACC GGACTGCCGA TCGGCGTGCT CGTCGGCGGC
CGACGCTTCC GCGAGGACAT CTGCCTCGAT GCGGCCGCAA TCATCGAGGC CGCCGCCGGG
GTCGCGACGC CGATCGATCC CCGTTTCTGA
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| Protein sequence | MSELWRLSAS EMVRQMAAGE VTSRELVEAH LARIDAVNPR VNAVVRVLRD EALKAAGDAD
RKRWEGARLG SLHGVPFTIK DCIDVAGLPT TWGSAVLAEA ISPVDAPVVE KMRAAGAIPI
GRTNLPDFAM RPSTDSSLYG LTRNPWDHDR TAGGSSGGDA AALASGMTPI GLGSDLGGSL
RNPANACGIV SVRPSAGRVP IAQQVPGPDQ HISNQLMNVQ GPMARTVADV RLVLETIIGA
HPKDPWAIDA PLVGKPIPSP IRVAVLTTLP GAPLESAVAD AVRGAADALA NAGYDVVEAC
PPRYEEAIET WGQIIVGDQR FGAEGVLPLL SPDTLRYFNF YLDGVPPFAS SFEMSEALIR
RHAIAMEWSA FQEDHPIILG PTWTRVTPGH GYDLEAGSLA GLLETIRPVT PANLLGLPSV
CVPSRLDPAT GLPIGVLVGG RRFREDICLD AAAIIEAAAG VATPIDPRF
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