| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1643 |
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| Symbol | |
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| ID | 5198439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1828001 |
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| End bp | 1829188 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581191 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_001262144 |
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| Protein GI | 148554562 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0771846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGATC GTTACGCCAC CCTCGCCAGC CATGCCGATT TCCGCCGGAT CGCGCGGTCG
CGGATTCCGC CCCTCATCTT CGATTATTTC GAAGGCGGTG CGGGCGACGA GATGACGATC
CATGAGAATG AGACCGCATT CGCAGCGGTG CGCTTGCCCC AAAGGGTGAT GGTCGACATG
TCGGCCGTCG AGACGGCGGG CGACCTGCTC GGCGAAGCCT GCTCGATGCC GCTCGCCCTG
GCACCCATCG GCTTTGCCGG CCTGATGTGC CGGCGCGGCG AGACGCAGGC GGCGCGCGCG
GCCGAAGCCG CGGGCGTCCC CTTCTGCCTG TCGGCCAATG CGATCTGCTC GGTCGAGGAG
GTCGCGCAGG CGGCCCGGCG CCCCTTCTGG TTCCAGCTCT ACATGATGCG CGACCGCGAC
GTCGTCGTCG ACCTGCTCCG GCGGGCCTGG GACGGCGGCT GCCGCACGCT GGTCTTCACC
GTCGATCTCG CCGTGCCCGG TATCCGGCGG CGCGACATCC GCAACGATCT CTTCGGCGGC
ACCACGCCGG CCAAGCTGCT CAGCTATGCA TGCCATCCCC GCTGGCTGGT CGACGTCGGG
CTGCGCGGCG GTCCGCACAC ATTCGGCAAC CTCGCGCCCT ATGTCGCGAA AGCGCGCCAT
CTGGCCGGCT TCGGGGGCTG GCTGATGCGG CAGTTCGACG CAGGCGTCAC CTGGAAAGAC
ATCGCCTGGC TCCGGAACCA ATGGAAGGGC AGGCTCGTCA TCAAGGGCAT CCTCGATAGG
CGGGACGCGA CAATGGCGCT CGATGCCGGT GCGGATGCCC TCGTCGTCTC CAACCATGGC
GGGCGCCAGC TTGACGGCGT TGCTCCGACG GCCGTCGCAT TGCCCGCGAT CGCTCGGGCG
GTCGGCGGGC GGGCGCCACT CCTCGTCGAT GGCGGTGTGC GCAGCGGACA GGATGTGCTG
AAGGCACTCC TGCTCGGTGC CGACGGCGTT CTCATCGGCC GCGCCTGGGC CTATGCCGCC
GCCGCGGGCG GCGAAGCGGC GATCGCCGCT CTGCTCGCAC GCTTCCAGGT CGAATTGCGC
ACGGCCATGA CGCTCGCCGG CTTCGCGGAT ATCGACACGA TCAGGGACCG GCGAATTCCT
CCCGCTTCCG ATGTCATGCC ATGTGACAAA TCGGGGCCCA ACATATAA
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| Protein sequence | MADRYATLAS HADFRRIARS RIPPLIFDYF EGGAGDEMTI HENETAFAAV RLPQRVMVDM
SAVETAGDLL GEACSMPLAL APIGFAGLMC RRGETQAARA AEAAGVPFCL SANAICSVEE
VAQAARRPFW FQLYMMRDRD VVVDLLRRAW DGGCRTLVFT VDLAVPGIRR RDIRNDLFGG
TTPAKLLSYA CHPRWLVDVG LRGGPHTFGN LAPYVAKARH LAGFGGWLMR QFDAGVTWKD
IAWLRNQWKG RLVIKGILDR RDATMALDAG ADALVVSNHG GRQLDGVAPT AVALPAIARA
VGGRAPLLVD GGVRSGQDVL KALLLGADGV LIGRAWAYAA AAGGEAAIAA LLARFQVELR
TAMTLAGFAD IDTIRDRRIP PASDVMPCDK SGPNI
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