| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1641 |
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| Symbol | |
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| ID | 5200042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1825976 |
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| End bp | 1827025 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581189 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_001262142 |
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| Protein GI | 148554560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.216253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.119722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG ACGTCGGCAA GGACAAGCTC TACATCCAGG ACGTGACGCT GCGCGACGGC
ATGCACGCGA TCCGCCACAT GTACGGGATC GACCATGTCC GCGCGATCGC CAGGGCGCTC
GACGAGGCCG GGGTCGACGC GATCGAGGTC GCGCATGGCG ACGGCCTCAA CGGCGCCAGC
TTCAACTACG GCTTCGGCGC GCATACCGAC TGGGAATGGC TGGAGGCCGT CGCCGACGTG
CTGACCCGCT CGGTGCTCAC CACCTTGCTG GTGCCCGGCA TCGGCACCGT CGAGGAACTT
CGCCGCGCCC ATGCCCTGGG TGTGCGCTCG GTCCGCGTGG CGACCCACTG CACCGAGGCG
GACGTCTCGA AGCAGCATAT CGGCATCGCC CGCGACCTCG GCATGGACGT GTCGGGCTTC
CTGATGATGA GCCACATGAT CGAGCCCGAG GCGCTCGCCC AGCAGGCGCT GCTGATGGAG
AGCTACGGCG CGCAGTGCGT CTATGTCACC GACAGCGGCG GCGCGCTCGA CATGGACGGG
GTGCGCGCCC GCTTCCAGGC CTATGACCGG GTGCTCAGGC CCGAGACGCA GCGCGGCATG
CACGCCCACC ACAACCTCTC GCTCGGCGTC GCCAACTCGA TCGTCGCGGC GCAGCAGGGC
GCGGTGCGGA TCGACGCCAG TCTCGCCGGC ATGGGCGCGG GCGCGGGCAA CGCCCCGCTC
GAGGTGTTCG TCGCCGCGGT CGACCGCAAG GGCTGGAACC ATGGCTGCGA CGTCAACGCG
CTGATGGACG CCGCCGAGGA TCTCGTCCGC CCGCTGCAGG ACCGCCCGGT CCGCGTCGAC
CGCGAAACGC TCGCACTCGG CTATGCCGGG GTCTATTCGA GCTTCCTGCG CCATGCCGAG
AAGGCGGCGG CGGACTATGG CCTCGATGCC CGCGAAATCC TCATCGAGCT TGGCCATCGC
AAGATGGTCG GCGGCCAGGA GGATATGATC GTCGACGTCG CCCTCGACAT CAAGCGGAGA
GCCGAAGGCA AGCGGGCGGT CGCGCCTTGA
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| Protein sequence | MSFDVGKDKL YIQDVTLRDG MHAIRHMYGI DHVRAIARAL DEAGVDAIEV AHGDGLNGAS
FNYGFGAHTD WEWLEAVADV LTRSVLTTLL VPGIGTVEEL RRAHALGVRS VRVATHCTEA
DVSKQHIGIA RDLGMDVSGF LMMSHMIEPE ALAQQALLME SYGAQCVYVT DSGGALDMDG
VRARFQAYDR VLRPETQRGM HAHHNLSLGV ANSIVAAQQG AVRIDASLAG MGAGAGNAPL
EVFVAAVDRK GWNHGCDVNA LMDAAEDLVR PLQDRPVRVD RETLALGYAG VYSSFLRHAE
KAAADYGLDA REILIELGHR KMVGGQEDMI VDVALDIKRR AEGKRAVAP
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