| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1640 |
|---|
| Symbol | |
|---|
| ID | 5200041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1825035 |
|---|
| End bp | 1825979 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640581188 |
|---|
| Product | acetaldehyde dehydrogenase |
|---|
| Protein accession | YP_001262141 |
|---|
| Protein GI | 148554559 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4569] Acetaldehyde dehydrogenase (acetylating) |
|---|
| TIGRFAM ID | [TIGR03215] acetaldehyde dehydrogenase (acetylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.245407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.308557 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA AGGTCAAGGC GGCGATCATC GGATCGGGCA ATATCGGCAC CGACCTGATG
ATCAAGATGA TCAAATATCC CCAGAACATG GAGCTGGCGG CGGTCGTCGG CATCGATCCG
GCGTCCGAGG GCCTCGCCAT GGCGCGCGAG CGCGGCATCG CGACCACGCA TGAGGGGATC
GAGGGGCTGA AGAAGCTGCC CGACTATGCC GAGATCGGCG TCGTCTTCGA CGCGACCTCC
GCCTATGCCC ACAAGGTCCA TGACGAGGCG CTGCGCGCCG ACGGCAAGCT GGTGGTCGAC
CTGACCCCGG CGGCGATCGG CCCCTTCACC ATCCCGCCCG TCAACATGGA CGAGCATCTC
GACGCGACCA ACGTCAACAT GGTCACCTGC GGCGGCCAGG CGACGATCCC GATCGTCGCC
GCCGTCAGCC AGGTCGCCAC GGTCCATTAT GCCGAGATCG TCGCGTCGGT CTCGTCGCGC
TCGGCCGGTC CCGGCACCCG CGCCAACATC GACGAGTTCA CCCGCACCAC GGCGAGCGCG
ATCGAGAAGG TCGGCGGCGC CGCGCAGGGC AAGGCGATCA TCATCCTCAA CCCGGCCGAG
CCGCCGATGA TCATGCGCGA CACCGTCTTC ACCCTGTCCG AGGGCGCCGA CGAGGAGGCG
ATCCGCGCCT CGGTCGCGGC GATGGTCGCG AAGGTGCAGG CCTATGTGCC CGGCTACCGC
CTCAAGCAGG AGGTCCAGTT CGAGCGCTTC GGCGACAACA ACAAGCTGAA GATCCCCGGC
CGCGGCGAGT TCACCGGCAT CAAGACCTCG GTGTTCCTCG AGGTCGAGGG CGCCGGCGAC
TATCTGCCCA GCTATTCGGG CAATCTCGAC ATCATGACCG CCGCCGCCAA GGCGACCGGC
GAGCTGCTCG CGCAGCGCAT CATCGAACGG AGGGCCGCGG CATGA
|
|---|
| Protein sequence | MSQKVKAAII GSGNIGTDLM IKMIKYPQNM ELAAVVGIDP ASEGLAMARE RGIATTHEGI
EGLKKLPDYA EIGVVFDATS AYAHKVHDEA LRADGKLVVD LTPAAIGPFT IPPVNMDEHL
DATNVNMVTC GGQATIPIVA AVSQVATVHY AEIVASVSSR SAGPGTRANI DEFTRTTASA
IEKVGGAAQG KAIIILNPAE PPMIMRDTVF TLSEGADEEA IRASVAAMVA KVQAYVPGYR
LKQEVQFERF GDNNKLKIPG RGEFTGIKTS VFLEVEGAGD YLPSYSGNLD IMTAAAKATG
ELLAQRIIER RAAA
|
|---|
| |