| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1639 |
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| Symbol | |
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| ID | 5200040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1824253 |
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| End bp | 1825032 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581187 |
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| Product | 4-oxalocrotonate decarboxylase |
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| Protein accession | YP_001262140 |
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| Protein GI | 148554558 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.193054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGAGAC AGTTTGATCA TGCCGCGCGG CTACTGCGCG ACGCCTATCG GGGCGAGAGC
ATCGCGCCGC TGCGCGCCTT CCTCGAGCCA CTGGATATCG ACGGCGCCTA TGCGGTGCAG
GCGATCAACA CCCGCTACTG GATCGATCAG GGGCGCCGTC TGGTCGGGCG GAAGATCGGT
GCGACCGCAA AGGCGGTTCA GCGGCAGTTC GGCATCGATC AGCCCGATTT CGGCGCGCTC
TTCGCCGATA TGCGGATAGA CGATGGCGGG GTGCTCGACC CGGCGACGGT CACTCAGCCC
CGCGCGGAGG CGGAGATCGC CTTCCTCCTC GGGCGCGACC TCGCCGATCC CGACCTTTCG
CTGGACGATG TCGCCGCCGC GATCGACGGC GCCATGGCGG CGATCGAGAT CGTCGACAGC
CGCATTACCG GTTGGAAGAT CACCTTGTCT GATACCATTG CCGACAACGG GTCTTCGGCC
TTCTTCATAC TCGGTACCGA AGTGCGATCC CCGATCGGCC TCGATCTCTA CAGTTGCGGC
ATGGTCACCG AGATCAACGG GGAGATCGTT TCCGTCGGCG CCGGCGCCGC CTGCTTCGAC
CATCCCTATA AATCGGTCCG CTGGCTCGCC CGAACGCTGG CCCTGAACGG AGAGCCGCTG
CGCGCGGGCG ACATCCTGCT GTCCGGCGCG CTCGGCCCGA TGGTCGCGCT GACGCCGGGC
GACGAGGTCC GCACGCGGAT CGGCGGCCTC GGCACCTGCA CATTCACTTA CGGAGCGTGA
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| Protein sequence | MERQFDHAAR LLRDAYRGES IAPLRAFLEP LDIDGAYAVQ AINTRYWIDQ GRRLVGRKIG
ATAKAVQRQF GIDQPDFGAL FADMRIDDGG VLDPATVTQP RAEAEIAFLL GRDLADPDLS
LDDVAAAIDG AMAAIEIVDS RITGWKITLS DTIADNGSSA FFILGTEVRS PIGLDLYSCG
MVTEINGEIV SVGAGAACFD HPYKSVRWLA RTLALNGEPL RAGDILLSGA LGPMVALTPG
DEVRTRIGGL GTCTFTYGA
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