| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1632 |
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| Symbol | |
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| ID | 5198899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1815907 |
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| End bp | 1817589 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581180 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001262133 |
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| Protein GI | 148554551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC AGTTCGACGC GATCGTCGTC GGTTCCGGCA TCAGCGGGGG ATGGGCCGCG
AAGGAGTTGA CGGAACGTGG CCTGACGGTC CTGCTGATCG AGCGGGGCCC GATGGTGGAG
CATCAGGTCG ACTACAAGAC CGAGATGCTG GCGCCGTGGG AGCTGCAATA TCGCGGTCAG
GGCGATGCCG AGCTGTTCGC GCGCGATTAT GCGATCCAGA GCAAGGGCAT GTCCTTCAAC
GAATGGACCT ACCGGCACTT CGTCAATGAT CGCGAGAATC CCTATCAGAC GACGGCGGAG
AATCCGTTCC AATGGCGGCG AGGCTATCAG CTCGGCGGCA AGTCGCTGCT GTGGGGCCGG
CAATGCTATC GGTGGAGCGA TCTCGATTTC GGCGCCAATG CGGCCGACGG CCATGGCTGC
GACTGGCCGA TCCGCTATCA GGATGTCAGC CCCTGGTACG ATCATGTCGA GCAGTTCATC
GGCGTTTCGG GATCGAAGGA AGGGCTGCCG CAGCTTCCCG ACGGGCATTT CCAGAGGCCG
ATGGCGATGA ACGCCGTCGA GCTGGCGCTG AAGGCCAGGC TCGAGACGGC CTATCCCGAC
CGCAAGCTGG TGATCGGCCG CAGCGCCAAC ATGACCGAGG AGAAGGAGGG GCGGTCGGCC
TGCCAATATC GCAACATATG CGCGCGCGGC TGCTCGTTCG GCGCCTATTT CAGCACGCAG
AGCTCGACCT TGCCGGCGGC GCGGGCGACC GGCCGGCTGA CCCTGATCAC GGACAGCCTC
GTCGACTCGC TCGACTATGA TCCGAAGACC CGGCGCGTCG CCGGCGTACG GGTGCTGAAC
ACCGCGTCGC GGGAGCGGAA GACCTACACC GCCAAGGTCG TGTTCCTCTG CGCCGGCACG
ATCAACAGCG TGAGCGTGCT GCTGCGCTCG GCGAGCGCCG ACCAGCCGAA CGGGCTCGCC
AATGGCAGCG GAACCCTGGG GCGTTATTTC ATGGATCACG CCCTGACGAT GTCGGTCGTC
GCCGAAGTGC CCGGCTTCCT CGATCATGGC TATTTCGGCA ATCGGCCGAA CGGCATCATC
GTGCCGCGCT ACTATAATCT CGACAATCGG CAGGGCGATC TGGTGCGCGG CTATTCCTAT
CAGGGCGGCG CCTACCGTCG CGGCTGGACG CGCGGCGCGA ACCGGGCGGG GGTGGGCAAG
GCCTTCAAGC AGGAGCTGCA CGCGCCGGGC GAATGGAATT TCCTGCTCGG CGCCTTCGCC
GAATGTCTTC CGCGCGCGGA GAACCGGATC TCGCTCGATC CGGCGATGAC CGATCCGTTC
GGCATCCGTC AGACGCGCAT CGACTTCGCC TATGGCGACA ATGAGCGGCG CCTGCTGGCG
AAGGCGGGGC AGGAGGCCAA GGATATGGTG GCGTTGCTCG GCGCGAAGCT GGTCAGCTAT
TCGGAAGACC CGGGTCCCGG CGGCACCGCG GTGCACGAAA TGGGCGGCGC GCGCATGGGC
CGTGACCCCG CGACGTCGGT GCTCAACGCG CATAACCAGG CGCATGACGT CGCCAATCTG
TTCGTCACCG ACGGTGCCGC GATGGCGTCG TCGGCCTGCC AGAATCCGTC GCTCACCTAC
ATGGCGCTGA CGGCACGCGC GGCTGCCCAT GCCGCCGAGC GGGTGCGGCA AAACGCAATA
TAG
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| Protein sequence | MSTQFDAIVV GSGISGGWAA KELTERGLTV LLIERGPMVE HQVDYKTEML APWELQYRGQ
GDAELFARDY AIQSKGMSFN EWTYRHFVND RENPYQTTAE NPFQWRRGYQ LGGKSLLWGR
QCYRWSDLDF GANAADGHGC DWPIRYQDVS PWYDHVEQFI GVSGSKEGLP QLPDGHFQRP
MAMNAVELAL KARLETAYPD RKLVIGRSAN MTEEKEGRSA CQYRNICARG CSFGAYFSTQ
SSTLPAARAT GRLTLITDSL VDSLDYDPKT RRVAGVRVLN TASRERKTYT AKVVFLCAGT
INSVSVLLRS ASADQPNGLA NGSGTLGRYF MDHALTMSVV AEVPGFLDHG YFGNRPNGII
VPRYYNLDNR QGDLVRGYSY QGGAYRRGWT RGANRAGVGK AFKQELHAPG EWNFLLGAFA
ECLPRAENRI SLDPAMTDPF GIRQTRIDFA YGDNERRLLA KAGQEAKDMV ALLGAKLVSY
SEDPGPGGTA VHEMGGARMG RDPATSVLNA HNQAHDVANL FVTDGAAMAS SACQNPSLTY
MALTARAAAH AAERVRQNAI
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