Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1631 |
Symbol | |
ID | 5198898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1813444 |
End bp | 1815744 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640581179 |
Product | TonB-dependent receptor |
Protein accession | YP_001262132 |
Protein GI | 148554550 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.888347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGGA CGCGAATCTC AGTCGAACGG ATGTGTCGGG TGACCCGTTA CGGACGGGCC CTGCCGGCAT CGGACGGATT TCGGCCGGCC CGCCATGGCG CTTCCCATCG ATTTGATTTT ATCAGGGTTG GAAAGGGGAA CCTTATGAAG AGCTTCAAGT CGTTCGGCGG CAAGCGCGGC CTGCTCGCGG GCGCCGCGAT GGTGATGGCG GTGGTGATGC CGGGGGCCGC GATGGCCCAG GAAGCCGCCG CTGTCGACGA GGGCGGCATC GGCGAGATCG TCGTGACCGC AGAGAAGCGC GAGACGACCG TCCAGAAGAC GCCGATCGCC GTCTCCGTCC TGGATGCGGA CGCGATCCGG CGGAACGGGG TGAACAGCCT GGTCGATCTG TCGTCGCTGA CGCCGAGCCT CAACTTCGCG CAGAATTCGG TCAATACGAT CATCACCATC CGCGGCGTTT CGAGCCGCGA CACCACCGAG ATCGGCGACC CGGCGGTCTC GATCGCCACC GACGGCTTCT ATTATCAGCG CCCCTTCGGC TTCAACGACA CGCTCTACGA CCTCGAGCGC GTGGAGGTGC TGCGCGGTCC GCAGGGCACC CTGTACGGCC GCAACGCGAC CGGCGGCGCG ATCAACTTCA TCACCGCGAA GCCGGGCAAG GAATTCGGCG GCTTCGCCAC GGTGGGCGTC GGCGACTATA ATCTCGTCAC CGCCGAGGCC GCGGTCAACG TCCCGCTGGC CGACAATCTC CAGACCCGCG CGTCGGTCTA CATGCAGAAG CGCGACGGCT ATCGGAAGAA CAACTATGCG GGCAAGGACG GCGACGATGC CGACGCCGTG TCGGCGCGCT TCCAGGTCAA GTTCGACCCC ACCGAGCGCC TGTCCTTCCT GTTCTCCGCG CAGACCACCA GCATCGGCGG CGTCGGCCCG ACCTTCTACG GCGTGCTGTT CAACGGTCCG GTCAACAACA ATGTCCGCCC CGCGATCGAC CGCGACGGTT CCGTCCTCGG CTCGCCGCGG CAGAGCATCG ACGGCACCAA CAAGTCGATC CAACTCACCG CGACCTATGA TTTCGGCATC GCCACGCTCA CCTATCTCGG CGGCTTCCGG AACCAGAAAT ATCGCCAGGT GCGCGATCTC GACGGCGTCG TGAAGTCCGA CGCCTATTTC CTGCCGAGCG AGGATGCCCG CGACTGGCAG CATGAGGCGC GGCTGACCTC GAACGGCGAC GGCCCGTTCA AGTGGCAGGC CGGCGTCTTC TATTTCCACG AGAAGAACAA CACCAACACC GACTTCTCCA GCTTCACCAA CCCGATCAAT CCGGGCCAAC CGGTGGCGCG TTTCGCCTTC CGCTATCCGA GCGTGATCGC GCGATCGAAG GCGGTCTTCG GGCAGGCTTC CTATGAGGTG GTTCCCGGCC TGTCGCTGGA GGCGGGCATC CGCTACTCGA AGGACTACAA GGCGCGTCGC GGCTATTCCA ACACCACCGG CACCGCCTAT ACCGGCATCG GCAACGTTCC GACCGACGTG AACGCGAGCA GCAGCAAGAC CACGACCCAT TTCGCGGTGA ACTGGCAGTT CACCCCGCGC AACCTGCTCT ATGTGAAGCG CGATACCGGC TACAAGGCGG GCGGCTTCAG CGACGTCCAG AATATCGGCA ACGTGCCCTA CGGCCCGGAG AACATCACCT CCTACGAGAT CGGTTCGAAG AACCGCTTCC TCGACAACCG GTTGCAGCTC AACGTCTCGG CCTATCGCTA CAACTACAAG GATCAGCAGA TCAGCCAGTT CAACAATGGC TTCACCGCCA TTTTCAATGC CGGCAAGTCG CGGATCAAGG GTGTCGAGGT CGAGGCGGTG GCGCAGCCGG TGCCGGCGCT GCGGTTCGAC GGATCGATCG CCTATCTGGA CGCGAAGTTC ATCGATTTCC TGGTCAGCAA CGTCCAATAT GCCGGCAACA AGCCGCCGAG TTCGCCCAAA TGGCAGCTGG GCGCCGGCCT CCAATATGAG CTCGCCCTGG GCGACGGCAC GCTGACCCCG CGCGTCCAGA CCCATTATGA GAGCGAGTCC TATCTCGCCT TCACCAATTT CGAGCGCGAG CGGAACCGCA AATTCTCGCG CACCGACCTG ATGCTGACCT ACAACGCCCC GGACAATCGC TGGAGCCTGC AGGGCTATGT CCGCAACCTC GAGAACAAGA TCGTGATCAC GGCGGCATCC GCCAGCGGTC TGTTCGGAGC CTATACCTAT CAGCTGGCTC CGCCGCGCAC CTATGGCGCG CGGCTCACCT ACAACTTCTG A
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Protein sequence | MNGTRISVER MCRVTRYGRA LPASDGFRPA RHGASHRFDF IRVGKGNLMK SFKSFGGKRG LLAGAAMVMA VVMPGAAMAQ EAAAVDEGGI GEIVVTAEKR ETTVQKTPIA VSVLDADAIR RNGVNSLVDL SSLTPSLNFA QNSVNTIITI RGVSSRDTTE IGDPAVSIAT DGFYYQRPFG FNDTLYDLER VEVLRGPQGT LYGRNATGGA INFITAKPGK EFGGFATVGV GDYNLVTAEA AVNVPLADNL QTRASVYMQK RDGYRKNNYA GKDGDDADAV SARFQVKFDP TERLSFLFSA QTTSIGGVGP TFYGVLFNGP VNNNVRPAID RDGSVLGSPR QSIDGTNKSI QLTATYDFGI ATLTYLGGFR NQKYRQVRDL DGVVKSDAYF LPSEDARDWQ HEARLTSNGD GPFKWQAGVF YFHEKNNTNT DFSSFTNPIN PGQPVARFAF RYPSVIARSK AVFGQASYEV VPGLSLEAGI RYSKDYKARR GYSNTTGTAY TGIGNVPTDV NASSSKTTTH FAVNWQFTPR NLLYVKRDTG YKAGGFSDVQ NIGNVPYGPE NITSYEIGSK NRFLDNRLQL NVSAYRYNYK DQQISQFNNG FTAIFNAGKS RIKGVEVEAV AQPVPALRFD GSIAYLDAKF IDFLVSNVQY AGNKPPSSPK WQLGAGLQYE LALGDGTLTP RVQTHYESES YLAFTNFERE RNRKFSRTDL MLTYNAPDNR WSLQGYVRNL ENKIVITAAS ASGLFGAYTY QLAPPRTYGA RLTYNF
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