| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1628 |
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| Symbol | |
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| ID | 5198895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1810998 |
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| End bp | 1811957 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640581176 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001262129 |
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| Protein GI | 148554547 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGG ACAGAAGGCG TTTCCTCTCC AATGCGGGCG CGGCAGCCCT GCTGCTCAGT
GCCGCGCCAT CGCTCGCCCG TTCGCGGGCA AGGCATTTCG GCGTCCAGCT CTTCTCGATC
CCGAAGATGC TGGAGCAGGA CTTCGCGAAG GCCATCGGCT TCCTCGCCAA GCTCGGCTAT
CGGGAGGTCG AGACCTACGG CCCCTATACG TTCAGCGATC CCACGCAGAT CGCGCATTGG
AAGCGCATCA CGCCCGAGCT CGGTTTCTCG GGCAGCGGTT TCTTCGGCAA GACACTGGCC
GAGGCGCGCA CGATCCTGAA GGCCAACGGC ATCTCCGTTC CGTCGATGCA CACCGACCTG
CTCACGCTGC AAGGCCGGAT GGGGCCGCTG GCGGAGGCCG CGCATCAGTT GGGCGCCACC
TATGTCACCC TTCCGTCGAT ACCCGCGGAC CATCGCCAGA CGCTCGACGA TTACAGGCGT
ACGGCCGACA TCTTCAACCA GGTCGGGGCC GACGCCATCA AGCATGGCGT GAAATTCGCC
TATCACAATC ATGGCTATGG CCTGAAGCCG GTCGATGGCC AGGTGCCGCT CGAACTGTTG
CTGAAGGCCA CCGATCCGAC CAAGGTCTTC CTCGAGCTGG ACCTGTACTG GACCGTTGCC
GGCGGCGCCG ATCCGATCGA TCTCCTGAGG CGCCACAGCG GCCGCTATAA GATGATCCAC
CTGAAGGACA TGAAGGAAAT CCACCATTTC GAAGGTGACG GCGGTACGCC GGACCAGTGG
ATCAAGATGT TCCCCTACAT GACCTATCTG GGCGACGGCG CGATCGACCT GCCGGCGGTC
CTCGCCATGG CCGAGACGTC CGGGGTCGAG CATTATTTCG TCGAGCAGGA TACCGTCGCC
GATCCCGAGA CCGCGCTCAG GAACAGCGCC GGCTATCTGC TGAAGCAAGG TTTCAAATGA
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| Protein sequence | MMMDRRRFLS NAGAAALLLS AAPSLARSRA RHFGVQLFSI PKMLEQDFAK AIGFLAKLGY
REVETYGPYT FSDPTQIAHW KRITPELGFS GSGFFGKTLA EARTILKANG ISVPSMHTDL
LTLQGRMGPL AEAAHQLGAT YVTLPSIPAD HRQTLDDYRR TADIFNQVGA DAIKHGVKFA
YHNHGYGLKP VDGQVPLELL LKATDPTKVF LELDLYWTVA GGADPIDLLR RHSGRYKMIH
LKDMKEIHHF EGDGGTPDQW IKMFPYMTYL GDGAIDLPAV LAMAETSGVE HYFVEQDTVA
DPETALRNSA GYLLKQGFK
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