Gene Swit_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1627 
Symbol 
ID5196473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1810122 
End bp1810973 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content69% 
IMG OID640581175 
Productaldo/keto reductase 
Protein accessionYP_001262128 
Protein GI148554546 
COG category[R] General function prediction only 
COG ID[COG4989] Predicted oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCC ATCCTCTGGC TTCGGACATC GGCTGGGGAA GCTGGCGGCT GTGCGAGGAT 
GGCAGCCATC CGCTCGAACG CATCGACGCG GCGATCGAAG CCGGCTTCAC CCTGTTCGAC
ACCGCCGACA TCTATGGAAC GGATTCCGCA GGCTTCGGCG CCGCGGAGGC GCTTCTGGGC
GAGATGCTGC GCGACCGGCC GGGCCTGCGC GATCATATCT GCCTCGCGAC CAAGGGCGGC
ATCCGCCCCG GCATCCCCTA TGACAGCTCG CGAAGCCATC TGCTGGAGGC GCTGGAGGCC
TCGCTGCGGC GCCTGCGCGT CGAACGGATC GACCTGTATC AGATCCACCG CCGGGATTGG
CTCACCCGGC CCGACGAACT GGCGGCCACG CTGGGCATGA TGGTGGACAG CGGAAAGGTC
GGGGCCGTCG GCGTGTCCAA CTATGCGCCA TCGGAACTGG CGGCGCTACG GGCCTTCGCC
AGGACGCCGA TCCTGACGAC GCAGCCCGAA TTCTCCCTGT GGCATCCGCA GCCCCTCCAC
GACGGCACGC TGGACGATGC GATGACGCAG GGGATGACCG TCCTAGCCTG GTCGCCCCTC
GGCGGCGGGC GGCTGGCGGG CTGCACCGAT CGACTGGCGG AGACCCTCGG CGCGCTGGCC
GGGCAGCAGG GCGTGGACGT CGCCGCGATC GCCCTGTCCT GGGTGATGGC GCATCCGGCC
GGCGTGATCC CGATCGTCGG GTCCCAATCG CCCGAGCGAA TCCGGCGGGC GGCCGATGCC
AGGAAGGTCA GATGGACCCG CGAGGACTGG TACCGCCTGC TGGAAGCGGC GATCGGCCGG
AGGCTTCCCT GA
 
Protein sequence
MTFHPLASDI GWGSWRLCED GSHPLERIDA AIEAGFTLFD TADIYGTDSA GFGAAEALLG 
EMLRDRPGLR DHICLATKGG IRPGIPYDSS RSHLLEALEA SLRRLRVERI DLYQIHRRDW
LTRPDELAAT LGMMVDSGKV GAVGVSNYAP SELAALRAFA RTPILTTQPE FSLWHPQPLH
DGTLDDAMTQ GMTVLAWSPL GGGRLAGCTD RLAETLGALA GQQGVDVAAI ALSWVMAHPA
GVIPIVGSQS PERIRRAADA RKVRWTREDW YRLLEAAIGR RLP