Gene Swit_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1625 
Symbol 
ID5196471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1808534 
End bp1809502 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content74% 
IMG OID640581173 
Productglucokinase 
Protein accessionYP_001262126 
Protein GI148554544 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0837] Glucokinase 
TIGRFAM ID[TIGR00749] glucokinase, proteobacterial type 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG TCGCGGTCGA CCTGGGCGGA ACCAATGCGC GCTTCGCGGT GGCGGAGCTG 
CACGACGAGC GGCGTCCGAC GCTGGGTGCG GTCCACGTCT ACAAGACCGC CGACTTCTCG
GGGCTCCCCG CCGCCTGGGC CGCCTTCGCG CGCGACCTCG GCCATGCGCC GCCGTCGGTC
GCGAGCATCG CCGTGGCGGG GCCGGTCGAG GGCGAGCTGA TCCGCTTCAC CAACAATGAC
TGGACGATCC GCCCGGCGAC GGTCGCGCGC GAGCTCGGCA TCGAGCGGGT CGCCTTGTAC
AACGACTTCG CCGCGATGGC GGCGGCGGTG GGCGTGCTCG ACGGGGACGA GCTGGTCTCC
CTCGGCGGGC CGGAAGGGCC GCTGCCGGAT GAGGGCGTCA CCACCGTGCT CGGGCCCGGC
ACCGGGCTCG GCGTCGCCCA GCTGCTGCGT CGGCGCGGGC GCCGCATCGT GCTGCCGACC
GAGGGCGGGC ATGTCGACTT CGCGGCGCTC GACGGCTTCG AGGAGACGCT GCTCGCCCGG
CTGCGCGCGC GCCATCGCCG GGTGTCGGTC GAGCGGATCG TCTCGGGACC GGCGCTCGCC
GCCATCCACG AAACGCTGGC GATGATCGAC GGCCGGGCGA TCGTGCCGCG GGACGACGCC
GCGCTGTGGC AGGCGGCGAC CGGGGGCGAC GATCCGCTGG CGGCGCAGGC GCTCGACCGC
CTGACCATGG CATTGGGCGC GGTCGCGGGC GATCTCGCGC TCGCGCACGG CGCCAACGCC
GTGGTGATCA CCGGCGGGCT CGCCAACCGG ATCGAGGCCC GGCTCAAAAG CCCGCTGTTC
CACGACCGCT TCCGTGCCAA GGGCCGTTTC GAGACGCGCA TGGCGCAGCT CCCGGTCCGC
CTCGCCCGCC ACGCGCAGGC GGGGCTGCTC GGCGCGGCGG CGGCCTATCA GGAGGATGGA
CGAAGATGA
 
Protein sequence
MTIVAVDLGG TNARFAVAEL HDERRPTLGA VHVYKTADFS GLPAAWAAFA RDLGHAPPSV 
ASIAVAGPVE GELIRFTNND WTIRPATVAR ELGIERVALY NDFAAMAAAV GVLDGDELVS
LGGPEGPLPD EGVTTVLGPG TGLGVAQLLR RRGRRIVLPT EGGHVDFAAL DGFEETLLAR
LRARHRRVSV ERIVSGPALA AIHETLAMID GRAIVPRDDA ALWQAATGGD DPLAAQALDR
LTMALGAVAG DLALAHGANA VVITGGLANR IEARLKSPLF HDRFRAKGRF ETRMAQLPVR
LARHAQAGLL GAAAAYQEDG RR