Gene Swit_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1622 
Symbol 
ID5197006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1804088 
End bp1805044 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content67% 
IMG OID640581170 
Productacetamidase/formamidase 
Protein accessionYP_001262123 
Protein GI148554541 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTTGC ACCAACTGGC GGCGACGCCC GAGACGGTTC GGATCGGCAT GTTCGACGCG 
AGCTTTCCAC CGGTTCTCAG CATCGATCCC GGCGACACGG TGGTGATCGA AACGGTGTCG
GGCTGGCGCC AACATCTGCC GCCGGCGGAT TCCGGCATCG CCATCCCGCC TGCCTTGAAC
CGCATCATCG CGGCCGACCT GCCGCGGATG GCCGGACATA CGATCACCGG CCCGGTCGAG
GTGGTCGGCG CCGAGCCCGG CGACATGCTG GAGGTGCGGA TCGAGGCCGT CGAGCTCGGC
TCGGACTGGG GCTACACCTT CATACGCCCT CTCGACGGCG CCCTGCCGGA AGAATTCCCG
GAGACGGTCA TCACCCGTAC GCCGATAGAT CGCGCGCGGG GGCTGGCGAA GCTGCCGTGG
GGCCTCGACC TTCCGACCGC GCCGTTCTTC GGCGTCATGG GCGTGGCGCC GCCGGTCGCA
TTCGGGCGCA TCTCCTCGAA GGAGCCCCGG GTCCACGGCG GAAACATCGA CAACAAGGAA
CTGACGGCCG GAAGCACCCT GTTCCTGCCG GTGCATGTCG CAGGGGCCCT GTTCTCCGCG
GGCGACGGCC ATGGCCTGCA GGGGGATGGC GAAGTCTGCG TCACCGCGCT CGAGACCTGC
CTCACCGGCC GCTTCACCCT GATCCTGCAC AAGGGCGGCG GATTGCAGAA GCCCCGCTTG
CGGTTCCCCA GGGCAGAAAC CCCGACCCAC TTCATCAGCA TGGGCATGAA CGAGGACCTG
GATCAGGCGA TGAAGCAGGC GTTGCGCGAG ATGCTGTCGC TGATCTGCAG CCGGACAAAC
CTCTCTCGTG AGGAGGCCTA TCAATTCTGC TCCCTGGCCG TGGACTTCAG GGTCACCCAG
GTCGTCAACG GGCATAAGGG CGTCCACGGC ATGTTGCGGA AGGGGCTGTT GTTCTGA
 
Protein sequence
MALHQLAATP ETVRIGMFDA SFPPVLSIDP GDTVVIETVS GWRQHLPPAD SGIAIPPALN 
RIIAADLPRM AGHTITGPVE VVGAEPGDML EVRIEAVELG SDWGYTFIRP LDGALPEEFP
ETVITRTPID RARGLAKLPW GLDLPTAPFF GVMGVAPPVA FGRISSKEPR VHGGNIDNKE
LTAGSTLFLP VHVAGALFSA GDGHGLQGDG EVCVTALETC LTGRFTLILH KGGGLQKPRL
RFPRAETPTH FISMGMNEDL DQAMKQALRE MLSLICSRTN LSREEAYQFC SLAVDFRVTQ
VVNGHKGVHG MLRKGLLF