Gene Swit_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1618 
Symbol 
ID5197002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1798929 
End bp1800356 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content62% 
IMG OID640581166 
Productaldehyde dehydrogenase 
Protein accessionYP_001262119 
Protein GI148554537 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAC AGCTGAACTT CTATATTGAC GGCCAATGGG TTCCACCCGC CGTCAAGCAC 
GACTTCGACG TGATAAACCC CGCGAACGAG GAGCCCTGCG CCCGAATTTC GCTAGGTTCG
GAGGCGGATG TCGAGCGAGC GGTCGCGGCT GCCAGGCGTG CCTTTGACAG CTTCTCCAGA
ACCAGCATTT CCGAACGCGC AGCGTTGCTG GACAAGATCA TAGAGATCTA CAAACGCCGC
CTGCCCGAAA TGGCTCACGC CATTTCGATC GAGATGGGCG CCCCCATGCC GCTCGCTCTC
AGCGCGCAGG CGCCAGCCGG ACTTGGCTAT CTGATCGATG CCCGGTCGCA GCTCGATAGC
TTCGAATTCG AACATGACGT CGGCAGCGCG CGGATCATCC GCGAGCCTAT TGGCGTCGTC
GGGATGATCA CGCCCTGGAA CTGGCCACAG AACCAGATAT GCGCGAAGCT CGGCGCGGCG
CTCGCCGCCG GTTGCACCAT GGTGCTGAAG CCATCGGAGT TGGCGCCGCT CGATGCCATG
CTACTTTCCG AGATCATCGA TGAAGCCGGC GTTCCCGCCG GCGTCTTCAA CCTGGTGAAC
GGCGACGGGG CTCGCGTTGG CGCGGCGCTT CCCGCGCATC CCGACATCGA CATGATAAGC
TTCACGGGTT CGACGCGCGC CGGCCGTTCG ATCATGCAGG CAGCCGCCGG CACGATCAAA
CGTGTCGCGC TCGAACTGGG AGGCAAGAGC CCCAACATCA TCCTGGAAAG CGCCGACCTG
GAACGCGCCG TGACCCGCGG GATGATCCAT ATGGCAAGCA ATACGGGACA AAGCTGCAAT
GCCCCGTCCC GTATGTTGGC GCCGCGCAAA TTCTACGACC AGATCGTCGC GATCGCTGCG
AAGGCCGCCA CTGCCTTGAA GGTCATGCCG CCGGATGAGG CCGTGAAAGG CGCGATTGGG
CCACTCGCCA ACGCCGCCCA GTTTCACAAG GTGCAGTTGC TCATCCAGAA AGGCATCGAG
GAAGGCGCCA CGGTCGCCGC GGGTGGCACG GGACGACCGG AGGGCTTCGC TCGCGGTTAT
TATGTGCGTC CCACGGTATT TGCCGACGTC ACCAATCAGA TGACGATCGC GCGGGAGGAA
ATCTTTGGGC CGGTCCTCTG CATCATCCCA TATGATACGG TCGAGGAGGC TATCGCACTC
GCCAACGATA CCGATTACGG GCTCGCGGCC TATGTCCACG GCGATCAGGA AGAAGCGCGT
TGGGTGGCGC ATCGCCTGCG CGCAGGCAAT GTGCACCTGA ACGGCGGATA TTCGGAGGCC
AGCACCCCAT TTGGCGGCTA TAAGCAGTCG GGCCTCGGAC GCGAAGGTGG CCCTTTTGGC
CTGGAGGAAT TCCTCGAGGT GAAGGCCGCC ATAGGCTGGG ACAACTGA
 
Protein sequence
MREQLNFYID GQWVPPAVKH DFDVINPANE EPCARISLGS EADVERAVAA ARRAFDSFSR 
TSISERAALL DKIIEIYKRR LPEMAHAISI EMGAPMPLAL SAQAPAGLGY LIDARSQLDS
FEFEHDVGSA RIIREPIGVV GMITPWNWPQ NQICAKLGAA LAAGCTMVLK PSELAPLDAM
LLSEIIDEAG VPAGVFNLVN GDGARVGAAL PAHPDIDMIS FTGSTRAGRS IMQAAAGTIK
RVALELGGKS PNIILESADL ERAVTRGMIH MASNTGQSCN APSRMLAPRK FYDQIVAIAA
KAATALKVMP PDEAVKGAIG PLANAAQFHK VQLLIQKGIE EGATVAAGGT GRPEGFARGY
YVRPTVFADV TNQMTIAREE IFGPVLCIIP YDTVEEAIAL ANDTDYGLAA YVHGDQEEAR
WVAHRLRAGN VHLNGGYSEA STPFGGYKQS GLGREGGPFG LEEFLEVKAA IGWDN