Gene Swit_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1608 
Symbol 
ID5199472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1789748 
End bp1790173 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content60% 
IMG OID640581156 
Productdehydratase 
Protein accessionYP_001262109 
Protein GI148554527 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTG TCACGCCGAG CTATGAAGAC GTGCAAGTTG GCGATGCCAT TCCCGCCTTG 
TCGCTGGACC CCATCTCGCG AACGACCCTC GCGCTCTATT GCGGTGCGTC AGGTGACCAT
CTGCCGGTGC ATGTCGATCT GGATTTCGCC CGCGAGAACG GCATTCCCGA CGTGTTTGCG
CATGGCATGC TGTCAATGGC GTATTTGGGG CGCGCCTTGA CCAACTGGGC GCAGATCGAT
CGCCTCCGCG CCTACAATGT CCGCTTCGTG GCGATCACGC ACGTGCATGA CACGGTCTCC
TGTTCGGGGA CCGTCGTGGA GAAATTCGAA GCCGATGGCG AGAAGCGCGT GCGCCTGGCC
CTGGAAGCAA AAACGGAAAC TGGAGGCGTC ACCCTTCGCG GTGAGGCCGT GATCGCTTTA
ATCTGA
 
Protein sequence
MMTVTPSYED VQVGDAIPAL SLDPISRTTL ALYCGASGDH LPVHVDLDFA RENGIPDVFA 
HGMLSMAYLG RALTNWAQID RLRAYNVRFV AITHVHDTVS CSGTVVEKFE ADGEKRVRLA
LEAKTETGGV TLRGEAVIAL I