| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1607 |
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| Symbol | |
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| ID | 5196856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1788909 |
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| End bp | 1789736 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640581155 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262108 |
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| Protein GI | 148554526 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG GAAGACTCGA AGGGAAAGTC GCGCTGGTGT CCGGATCGGG GCGCGGCATC
GGTCGTGCCA TCGCGCTGAA GCTCGCAAGT GAGGGCGCGC GGGTGGTCGT CAACGATCTC
GACGCTGACC CCGCGCAAGA GGTCGTGGAG GCGATCAAGA GCGCCAATGG TGAAGCCATC
GCCTGCCTCG GATCGGTTTC GGAGCCCGAT TTCGGCGAAA GATTCGTCGC CGCCGCGATG
AGCAATTATG GCGGTTTGGA CATCATCGTG AACAATGCGG GGTTCACGTG GGACAGTGTC
ATCCAGAAGA TGACCGACGA GCAGTTCGAC GCCGTGATGG ATGTCCATCT CAAGGCCCCG
TTCCGTATCC TCCGCGCAGC GGCGGAACCG ATCCGCACCC TTTCGAAGCA AGAGGCGCTG
GCGGGCAAGG TGAATGTTCG CAAGGTCGTG AACATCTCCT CGGTCGCAGG CACGAACGGC
AATCCGGGAC AGGCGAACTA TTCGTCGGCA AAGGCTGGTG TGACGGGCCT TACCAAGACG
CTTGCCAGGG AATGGGGGCG CTACAAGGTG ACGGTCAACT GCGTCGCGTT CAATTACATC
CAGACCCGGC TGACGATGCC GCTCGGCGGC GAGCAGGCGC AAATCGACGT CGAAGGACGC
CTGCTCAACG TAGGCGTGCA GCAAAATGTA CTGACCACCC TGGACGCGAC GATCCCGCTG
GGGCGCGGCG GGACGCCGGA AGAAGCGGCG GGCTCGGTGT ATCTCTTCTG CATCCCGGAA
TCCGATTATG TGTCCGGCCA GGTCCTGATG TGCAGCGGGG GACTATAG
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| Protein sequence | MSNGRLEGKV ALVSGSGRGI GRAIALKLAS EGARVVVNDL DADPAQEVVE AIKSANGEAI
ACLGSVSEPD FGERFVAAAM SNYGGLDIIV NNAGFTWDSV IQKMTDEQFD AVMDVHLKAP
FRILRAAAEP IRTLSKQEAL AGKVNVRKVV NISSVAGTNG NPGQANYSSA KAGVTGLTKT
LAREWGRYKV TVNCVAFNYI QTRLTMPLGG EQAQIDVEGR LLNVGVQQNV LTTLDATIPL
GRGGTPEEAA GSVYLFCIPE SDYVSGQVLM CSGGL
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