| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1602 |
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| Symbol | |
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| ID | 5198287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1782492 |
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| End bp | 1783274 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581150 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262103 |
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| Protein GI | 148554521 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA GCTCATCTGT CGCCGCGATC GTCACCGGCG GTGCCTCGGG ATTGGGCCTG
GCAACGACGC GGGCATTGCG TGCTCGTGGT GTCCAGGTCG CCATCTTCGA TGTGAACCAA
GCGGTCGGGG AGGCCGCCGC GGCAGAAGAG GGCGCCCTTT TCTGCAATGT CGATGTAACC
GACGAGGCGA GTCTCGACAG TGGTTTCGCG CTCGCTCGGG CCGCGCATGG ACAGGAGCGC
ATCCTGGTCA ACTGCGCCGG TATCGGCGTG GCCGGTAAGA CGGCCAGGCG CGACAGGCAA
ACGGGTGAAA TCACGCATTT CCCGCTCGAG GCCTTCGCGC GGGCGCTTCA GATCAATCTT
CTGGGCACGT TCGGCAGCAT AGCCAAGTCT GCGGCCGGGA TGATGGCGCT CGATCCTCTT
CCAGATGGAG AGCGCGGCGC TATCGTCAAC ACCGCGTCGG TCGCCGCTGA GGACGGACAG
ATGGGGCAGG CGGCCTATTC CGCGTCGAAA GCCGGCGTTA TCGGCATGAC GCTTCCCATC
GCGCGCGATC TCGCCTCGGA AGGGATCAGG GTGAACACCA TCCTGCCGGG CACATTTTCG
ACACCGATGC TGTACAGCGC GCCGCAAAAC GTCAGGGACG GTCTGGCGGC GGCCGTTCCC
TTCCCGAAGC GGCTTGGAGA GCCGAGCGAA TATGCTTCGT TGGCGATCGA GATGATTACC
AACGGATATT TGAACGGCGA GGATATCCGT CTGGATGGCG CGATTCGCAT GGCGCCGCGC
TAG
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| Protein sequence | MQLSSSVAAI VTGGASGLGL ATTRALRARG VQVAIFDVNQ AVGEAAAAEE GALFCNVDVT
DEASLDSGFA LARAAHGQER ILVNCAGIGV AGKTARRDRQ TGEITHFPLE AFARALQINL
LGTFGSIAKS AAGMMALDPL PDGERGAIVN TASVAAEDGQ MGQAAYSASK AGVIGMTLPI
ARDLASEGIR VNTILPGTFS TPMLYSAPQN VRDGLAAAVP FPKRLGEPSE YASLAIEMIT
NGYLNGEDIR LDGAIRMAPR
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