| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1593 |
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| Symbol | |
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| ID | 5196777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1773902 |
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| End bp | 1774909 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581141 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001262094 |
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| Protein GI | 148554512 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCCG TCCTCGCAAA ATTCGCACGA GCTGGTGGAG ATGGCGACGC GCTGTTAGCC
CGCTATAGGT TGACCAGTGC GATGCTGTCC GACCCTTGGA CGACGGTGCC GCTGGCCCGA
TATGTCGCGA TGTTCGAGGA GATGGCCGAT CTTCTGGACG ATCCGCTGCT GGGCGTACGG
CTGGGGATGG AAACCCGCCC GGTTGACCTG GGCCCGACCG GGCTGATCAT GGCGCGATCG
GGATCGGTGC GCAACGCGCT CGACCGGCTG GCGCGCTTCG TGAACAACCT GCAGTCGGGC
ACCCATTCGG CGCTGAATGA AGCAGATGAC CTGCTCGTCC TTACCTACCG GCTAAACGAT
CCAGCGATCT GGCCGCGCCG TCAGGACGCT GAGTTCACCC TGTCATCCGT GATCCGGATG
ATCCGCTCGG CCTTCGATCC GGACTGGGGC CCGATCCAGG TTCAGTTCGA ACATCCCGCG
CCCTCCGTCT CCGCCGCGCG CGCGCTTCGG CGGATGCTGG GCTGTCCGAT CCGGTTCGAG
GCGGCCAGCA ACGGGATGGT GATGGCGCTG GAGGAGGCGA AGGCACGCTT CCGGGACGAG
GATCATGACC TGATCGACGT GCTCGAACGC TATCTGACCG ACTTCACCCC GTCCGAAAGC
CTGAGTGACC GATGGCGCGA CAAGGTGCTG GCGCTGATCG TCACCTATCT TGGCCAGCAG
CCGGTCACGA CCGAGCGGCT GGCGGCCGAC CTGCGGCTTT CTCCACGCAG CCTGCAACGA
CGGCTGGCGG AGGAGGGAAC CTCGGTCAGG GCGCTGTTGC GCAGCCACCG CGAGGAACTG
GCCGACCATC ATCTGCAGGC GGGCGCATCG AACCTCGGCA ACCTTGCCGA GGCGCTCGGC
TATGCCGACG GCACCACTTT CTGGCGCGCG CATCGGAACT GGACGGGCCA GGCGCCCAGT
GCGGTCCGCC GGCGGCTGAC TGCCGATCAG AAGCGGTCGA GGCTGTAG
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| Protein sequence | MTAVLAKFAR AGGDGDALLA RYRLTSAMLS DPWTTVPLAR YVAMFEEMAD LLDDPLLGVR
LGMETRPVDL GPTGLIMARS GSVRNALDRL ARFVNNLQSG THSALNEADD LLVLTYRLND
PAIWPRRQDA EFTLSSVIRM IRSAFDPDWG PIQVQFEHPA PSVSAARALR RMLGCPIRFE
AASNGMVMAL EEAKARFRDE DHDLIDVLER YLTDFTPSES LSDRWRDKVL ALIVTYLGQQ
PVTTERLAAD LRLSPRSLQR RLAEEGTSVR ALLRSHREEL ADHHLQAGAS NLGNLAEALG
YADGTTFWRA HRNWTGQAPS AVRRRLTADQ KRSRL
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