Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1585 |
Symbol | |
ID | 5197928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1764893 |
End bp | 1765945 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640581133 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001262086 |
Protein GI | 148554504 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGGAC GGGTGGATGC TTTGACCGAC GAACGATCAG GGATCGAGTC TTCGAGCGCC GGCGGCGGGG TTACCCTGCT CGCCCCCCTG CAATCGGTGA TCGACTCGCT TCGCCCTTAT TATGGCGCCG CATCCGACGA GGGCTGGGGC GCGTGCGGCG TGCGGATGCG GGCCGAGATG GCCGGCGCGC AGGGCTGGCG CGACTGCTTC CACATCCGCG ATGGCTGCCT GATCATGGTG TCGGACGTGC GTCGTGACCT TGCATATACC GAGCAGTATC TGGGCGGCGG CCAAATCAAG TTTCATTTCC GTCTCGACGG CGACAGCATG ATCACGAGCG AGCATGGCCG AGAAACCGAG CTCAATCCGC TCTCCTTCGG CTTCCTCGTG CAGCCGATGG CCTCGGCCAA GCGCGAGAGC CCGCGGCCTG TCTCGCACGA GCGGTCGGTG ACGCTGATCT GCGATCCCGC ATTCCTCGAC GGGATCATCG ACTCGCCGTC CTCCTCATTG CCCCAGCCGA TCCGCTCGCT GCTGCGCCAT GGCGATCCCG ATTTCCATTG TTCGAGCCTG CCGATGCGAT CGGTCCTCCA CCGCATCGTC GCCGAGATCC TCGATCCGCC GTTCGGCGGT GCGATGCGGG CGATGTACAT GGAGGCGAAG ACCCTCGAGC TGTTGTGCCT GGCGCTCGGC GCGCTCGCCG ACGACAGCGA GACCAGCGTG CCGTTGCGGC CGCGCGACGT CCGCAAGGTG CAGGACATCT GCGTGCTGCT CGAGGAGAGG TTCGCCGACC CGCCGACGAT CCAGGAGCTG GTCCGCCAGT TCGTCTGGAA CGAGACCCAG CTCATGCAGT GCTTCCGCCG CGTCACCGGC ATGACGATCT TCGACTATCG CCAGAATTAC CGGATGGAAC GCTCGATGCA GTTGCTCAAG GGATCGCGCA TCTCGGTGAC CGAGGTGGCG TTCGAGATGG GCTATGAGCA TCCGAGCAAT TTCGCGACCG CCTTCCGGCG CCATTTCGGC ATATCGCCCA AGGCGGCGCG CGGCCTGACC TGA
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Protein sequence | MLGRVDALTD ERSGIESSSA GGGVTLLAPL QSVIDSLRPY YGAASDEGWG ACGVRMRAEM AGAQGWRDCF HIRDGCLIMV SDVRRDLAYT EQYLGGGQIK FHFRLDGDSM ITSEHGRETE LNPLSFGFLV QPMASAKRES PRPVSHERSV TLICDPAFLD GIIDSPSSSL PQPIRSLLRH GDPDFHCSSL PMRSVLHRIV AEILDPPFGG AMRAMYMEAK TLELLCLALG ALADDSETSV PLRPRDVRKV QDICVLLEER FADPPTIQEL VRQFVWNETQ LMQCFRRVTG MTIFDYRQNY RMERSMQLLK GSRISVTEVA FEMGYEHPSN FATAFRRHFG ISPKAARGLT
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