Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1583 |
Symbol | |
ID | 5197926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1761370 |
End bp | 1763544 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640581131 |
Product | TonB-dependent receptor |
Protein accession | YP_001262084 |
Protein GI | 148554502 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCA TCCTGACGAT GGGGCATTCG ATGCGGCGGG CGCTATGCTG CGCCTCGCTG ATGGCGCTGT GCGCTCCGGC GGCGCATGCG CAGCAGGCCG CGGCCGGCGT CGCGACGGGC GGCGACGGCG ACATCATTGT CACGGCGCGC AAGCGCGAGG AGACCCTGCT CGACGTGCCG GTCGCGGTTT CGGCCTTCTC CGGCGTGAAG CTCGAAGCAT CCGGCATCGC CAATGTCAGC AACCTGATCG GCGAGGTGCC CAGCCTGTTC ACCACGCAGA ACCAGACCTT CGGCCCCGCG CCCAACCAGA CCTATCTGGT CCTGCGCGGC GTCGGCGCGA CCTCCTCGAA CGATCCGGCG GTGGGCACCT TCCTCGACGG CGTCTATCAG ACCAGCCTGA ACTTCGATCA GGGCTTCCTC GATCTCGAAC GGGTGGAGAT ATTGCGCGGC CCGCAGGGGA CGCTTTTCGG CCGCAACACC CAGGGCGGCG CGCTGAATAT CGTCACCGCG AAGCCGGACG GGAATTTCCG GTTCAAGCTG CAGGGCGAGG CGGCGGAATT CGACAGCTAC AAGCTCGGCG GCAGCGCCAG CGGGCCGGTC GTCGAGGACA AGCTGTTCGC CGGCATGGCC GTGCAATATT CGCGGACCGA CGGCTATCTG CACAATGTCA CGCTCGATCG GAAGCAGGAC AATTCGAACA AGCTCGCCGG CCGCTTCACG CTGCGCGCGA CGCCCAGCGA CACGCTGGAG GTGATCCTCC GTATCGAAGG GTCGCGCTCG CGCTACGGCT ATCTCGGCTT CGGCGTGCCG GATGACGGCA GCAAGCGCTA TGTCACCCTC GACGGCGAGA AGCGGACCTC GCACGACCAT GGCTACGGCG GATCGCTGAC CGTCAATTAC ACGTTCGACG GCGCGGTGCT GACCTCGATC ACCGGCGCCA GCAAGACCAA GTCGCGCTAC TGGTTCGACT TCGATTCCGG GCCGGATCTG GGCAATTTCC AGGATCAGCG AACCAACCAG TCGCTGGTGT CGGAGGAGCT TCGCCTCGCC TCGGACGGCA GCGGGCCGCT CACCTGGCTG GCGGGCCTCT ATTATTTCGA CGAGACCCAC GATCAGGATC GCAATTTCGC GCAGGGCCAA TGCTCGGCCT GCGTCTTCCC GCCGATCTTC GATCCGGCCA ATCGCGTCCT CGAACAGACC AAGTTGTCGC GCGACGGCTG GGCGGCGTTC GGCCAGGCGA GCTATGATCT CGGCCGGCTC GATCTGACGC TGGGCGCTCG CTATGCGCGG GAGACGTCGA AAGCCCATCA GGCGGGCCTG ATCTTCCTGC CCGGCATCGG CGCCAATGAC AGCTTCGACG GCACCAACAA GGCGAGCTTC AAGAATTTCT CGCCGATGGC GTCGCTGGCG ATGCACTGGA CCGACGACGT CATGACCTAT GCGACCGTAG CGCGCGGCTA CAAGGCGGGC GGCTTCGACA AATATCCGGG CAGTTCGGCG GCGGTCGGCA TCCCGTTCGG CAACGAAACC TCGCTCAACT ATGAGATCGG CACCAAGGGA TCGCTGCTCG ATCGCAAGCT GACCTTCAGC CTCGTCGGTT TCCTGATCGA CATCCACGAC CAGCAGCTCG CTTCGACCGT GATCAGCCCG ACCACCGGCG TGCCGGTCGG CGTCACCACC AATGTCGGCA GTTCGCGCAG CAAGGGCGTC GAGTTCGAGC TTCAGCTACG GCCGGTCGCC GGGCTGATGC TGCGCGGCAA CACCGCCTAT GTCGACGCCA AATTCCGCAA GATCACCAGC CCGGTCGGAA CCCACCAGGT CGGCGACCGG CTGCCGTTCG TGCCGAAATG GACCGCCGCC GCCGGGGGCG ACTACACGAT CGCGCTCAGC GACGCGTTGA AGCTGACGGG AAGCATCGAC TATAGCTATG TCGGCAGCCA CTATATCGGC AACGGCGCGG CTCCGTTCGA CCCGATCCTG CCGATCAAGT CCTATGACAG TGCCGACGCG CGACTGACGG TGGCCGGGGC CCGCTGGGAC CTGACCCTGT TCGTCAACAA TGTCTTCGAC AGCTTCAACA TCACCCGCCG CTTCGCCCCT GCCTTCCAGA CCTATACGCG GGCGACGGTG GCGCCGCCCC GCCAGTTCGG CGTCCGCGCC GGTTTCCATT ATTAA
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Protein sequence | MTSILTMGHS MRRALCCASL MALCAPAAHA QQAAAGVATG GDGDIIVTAR KREETLLDVP VAVSAFSGVK LEASGIANVS NLIGEVPSLF TTQNQTFGPA PNQTYLVLRG VGATSSNDPA VGTFLDGVYQ TSLNFDQGFL DLERVEILRG PQGTLFGRNT QGGALNIVTA KPDGNFRFKL QGEAAEFDSY KLGGSASGPV VEDKLFAGMA VQYSRTDGYL HNVTLDRKQD NSNKLAGRFT LRATPSDTLE VILRIEGSRS RYGYLGFGVP DDGSKRYVTL DGEKRTSHDH GYGGSLTVNY TFDGAVLTSI TGASKTKSRY WFDFDSGPDL GNFQDQRTNQ SLVSEELRLA SDGSGPLTWL AGLYYFDETH DQDRNFAQGQ CSACVFPPIF DPANRVLEQT KLSRDGWAAF GQASYDLGRL DLTLGARYAR ETSKAHQAGL IFLPGIGAND SFDGTNKASF KNFSPMASLA MHWTDDVMTY ATVARGYKAG GFDKYPGSSA AVGIPFGNET SLNYEIGTKG SLLDRKLTFS LVGFLIDIHD QQLASTVISP TTGVPVGVTT NVGSSRSKGV EFELQLRPVA GLMLRGNTAY VDAKFRKITS PVGTHQVGDR LPFVPKWTAA AGGDYTIALS DALKLTGSID YSYVGSHYIG NGAAPFDPIL PIKSYDSADA RLTVAGARWD LTLFVNNVFD SFNITRRFAP AFQTYTRATV APPRQFGVRA GFHY
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