Gene Swit_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1580 
Symbol 
ID5199695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1757942 
End bp1758853 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content62% 
IMG OID640581128 
Producthypothetical protein 
Protein accessionYP_001262081 
Protein GI148554499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCA TGCATCCATC ATCGATGATG AACTCTGAAG CGGTCCAGGA CAAGCTCGCC 
TCCAATCGCA TCGAGCGCCG TCATCAGGCC AATGTCAACG AGGTCAGTCT GCTGGCCGGG
ATGATCCGTG ATGGCGAAGG TCGACGGATG GCCCCGAGCC ATGCCAGCCG TGGTGATGTC
CGTTATCGCT ATTACAACTC GGTCAATGAA GGGGAGGGGC CGCATGCTAG ACCGATCCGG
ATCGCTGCGC GCGACATCGA GAAGGCGGTC GTCGAAAGCC TACAACGGCT CATCGGAGAT
CGAGCGCAGT TGACCTTGCT CTACCCGCAG CATGGCGGCG AGGGATACGA GACCGCCGAC
CTGCTGCGCT CCGCAGCGCT GCTGCATCGA AACATCTCGA CCATGGCTCC GTCGGACCAG
CGGGCGCTGC TCTTGGATCT GTCGCTGCAG GTCATGGTCC ATGCCGACCG CATCGAGGCG
AAGATCGATC ACGCAGCGTT GGGAAGGCGA CTGGGGATCG GGCAGCTCGA TTCAGATCAG
GAGGTCGTCA AGCTCGCCAT TCCGACGCTG ATGGTACGGC GCGGCACCGA TGTGAAGTTG
ACCATTCAGT TCGATGCATC GGCATCGTCA TCGCGGCGTG ATCCCAAGCT GGTCGAACTG
ATCGTCAAGG CGCATCAGGC GAGGCGCATG CTCGGGCTCG ACGGCAGGCC GCCGACCATC
GCGTCGGACC TGGATTATTA TGCCCGCAAC CATCTGGCCC GGCTGGCGCG CTTCGCTTTC
CTGGGGCCTG AGATCGTCAC GGCCATCATG GAGGGATCGC AGCCGGCAAC AGTGTCGGCG
CGCAAGCTGA TGCGGACCTC GGATCTGCCG ATGGACTGGA AGCAGCAAAA GTCTATGCTC
GGCTTCAGCT GA
 
Protein sequence
MVSMHPSSMM NSEAVQDKLA SNRIERRHQA NVNEVSLLAG MIRDGEGRRM APSHASRGDV 
RYRYYNSVNE GEGPHARPIR IAARDIEKAV VESLQRLIGD RAQLTLLYPQ HGGEGYETAD
LLRSAALLHR NISTMAPSDQ RALLLDLSLQ VMVHADRIEA KIDHAALGRR LGIGQLDSDQ
EVVKLAIPTL MVRRGTDVKL TIQFDASASS SRRDPKLVEL IVKAHQARRM LGLDGRPPTI
ASDLDYYARN HLARLARFAF LGPEIVTAIM EGSQPATVSA RKLMRTSDLP MDWKQQKSML
GFS