Gene Swit_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1576 
Symbol 
ID5197744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1753621 
End bp1754463 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content60% 
IMG OID640581124 
Producthypothetical protein 
Protein accessionYP_001262077 
Protein GI148554495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTGA GCTTCAACGA TCTGCTCTTG AAAACGGGCT TTGACCTTTC CGAGGTGCGC 
CTGCTGCGCC ACCAGACCAG GACGCCGCAA GGGCGGACGC CCTATCTGCT ATGGCGCGAT
GATCGGGCCG CCTTTGATGA TTATCAGTCG GTTCAAACGG CGGCGAACCG GACGAAGCTG
GGAGCCCCCT GCTGGGCGAC GTTCGTCGTA CCTCCATCGG GCGGCACCTT GTTTGCCGGC
CTATATCGTG CCGAACGCCT CGGGCCGTCT CCGAAGGATA GGGTAGACCC CCTCTTCAAG
CGGACCGACG CTGAGCTGAC CGCCGACGAA CTGGATGCAT ATCGCCTGAC TTTATCGTCG
CCGCTCAATG ACTATGTCGG CAAGGTCTGG ATCGATTGGG GCCTGGCGGC CCGTAGCTGG
ATCCAACGTT CCGACAAGCA GGACAAGGCC ATCGAGGCGA TCACCGAATT TCGCGAGGAC
GCCTTTCCAG GCTACACGCA CTTCATTGCC AATATATCGG ACATTCCTAC GCTACCGCGC
AGCTGGGCCG AGGCGCTTCG AGCAGCCCAA GGGATATATT TGCTCACGTC CGACCGGACC
GGCGAATGGT ATGTCGGCTC GGCAACCAGC AGCGACGGCG GGTTTCTCGC CCGCTGGCTG
GCTTATGCCG CCGACGGGCA TGGTGGCAAT ATCGGTCTGA AGAGCAGCGA GCCGAGCGAC
TATCAGGTCA GCATCCTCGA GGTCGTGGGA TCTGCGACGA CCCTGAAGGA TACCCTCGCC
ATCGAAGCAC TATGGAAGCG CAAACTTCAA AGCCGAGAGA TGGGCAGCCT GCAGCGAAAT
TGA
 
Protein sequence
MILSFNDLLL KTGFDLSEVR LLRHQTRTPQ GRTPYLLWRD DRAAFDDYQS VQTAANRTKL 
GAPCWATFVV PPSGGTLFAG LYRAERLGPS PKDRVDPLFK RTDAELTADE LDAYRLTLSS
PLNDYVGKVW IDWGLAARSW IQRSDKQDKA IEAITEFRED AFPGYTHFIA NISDIPTLPR
SWAEALRAAQ GIYLLTSDRT GEWYVGSATS SDGGFLARWL AYAADGHGGN IGLKSSEPSD
YQVSILEVVG SATTLKDTLA IEALWKRKLQ SREMGSLQRN